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ThomasDOtto
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ratt
Rapid Annotation Transfer Tool
GNU General Public License v3.0
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RATT 'finding' genes in the wrong location.
#19
MrTheronJ
opened
1 year ago
1
features transferred with empty/invalid location
#18
0xaf1f
opened
1 year ago
1
reconciliation
#17
0xaf1f
closed
1 year ago
2
> start shell script
#16
haessar
closed
1 year ago
2
This prevents all the annoying warnings printed to the screen every time
#15
haessar
closed
1 year ago
0
From companion
#14
haessar
closed
1 year ago
1
helping with maintenance vs. forking RATT
#13
0xaf1f
closed
1 year ago
3
RATT transfers `order( , )` coordinates and loses a parenthesis
#12
0xaf1f
opened
1 year ago
5
Update documentation
#11
nataquinones
closed
1 year ago
2
mRNA transfer fails if < or > are present in the positions
#10
Lenascha
opened
2 years ago
0
Embl2Fasta creates non-unique sequence names for embl files with multiple sequences
#9
0xaf1f
opened
4 years ago
1
allowing spaces in gene names and "systematic IDs" in the `addTransla…
#8
jean-baka
closed
1 year ago
0
RATT fails to write the translation for genes whose names contain spaces
#7
jean-baka
closed
1 year ago
1
main.ratt.pl: initialize ref_shift hash ref prior to use (closes #5)
#6
0xaf1f
closed
1 year ago
0
RATT transfer step fails
#5
0xaf1f
closed
1 year ago
2
Refine command-line interface
#4
0xaf1f
closed
7 years ago
0
main.ratt.pl: Don't use deprecated expression for checking whether an array is empty
#3
0xaf1f
closed
7 years ago
0
This is the current version of ratt, as improved setting for transfering between good assemblies, like PacBio
#2
ThomasDOtto
closed
7 years ago
0
This is the first version, as on sourceforge, and publish in NAR
#1
ThomasDOtto
closed
7 years ago
0