TomHarrop honeybee-genotype-pipeline issues - Githubissues

TomHarrop / honeybee-genotype-pipeline

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downgrade snakemake (addresses #11)

#13 TomHarrop closed 3 years ago
0
downgrade snakemake (addresses #11)

#12 TomHarrop closed 3 years ago
0
v0.0.13 container is not working

#11 TomHarrop closed 3 years ago
1
bump

#10 TomHarrop closed 3 years ago
0
Docker

#9 TomHarrop closed 3 years ago
0
Switch to bcftools

#8 TomHarrop opened 4 years ago
1
Split runs out of suffixes for draft genomes

#7 TomHarrop closed 4 years ago
2
Per-sample BAM file insert size

#6 TomHarrop closed 4 years ago
0
add --csd argument (fixes #3)

#5 TomHarrop closed 4 years ago
0
Allow ploidy

#4 TomHarrop closed 4 years ago
0
Genotype the csd region separately

#3 TomHarrop closed 4 years ago
0
Allow different ploidy per individual using the freebayes cnv-map option

#2 TomHarrop closed 4 years ago
0
add stats calculations and plots

#1 TomHarrop closed 5 years ago
0