TomSkelly MatchAnnot issues - Githubissues

TomSkelly / MatchAnnot

Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.

GNU General Public License v3.0

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IndexError: tuple index out of range

#17 tky199996 opened 5 months ago
0
AttributeError: 'NoneType' object has no attribute 'group'

#16 Mr-Lawrence-521 opened 1 year ago
2
matchAnnot error

#15 wangchongq opened 4 years ago
1
Exon solely consisting of inserted sequence

#14 juheon opened 5 years ago
0
detection of novel isoform

#13 kanchanhole opened 6 years ago
0
Novelty with MatchAnnot?

#12 ghost opened 7 years ago
0
using gff as input

#11 adeslatt opened 8 years ago
0
RuntimeError ('transcript name %s exons out of sequence' % (tranName))

#10 nfrancoeur opened 8 years ago
0
IndexError:

#9 SongJiaMing1 opened 8 years ago
3
Is it possible to plot fusion gene with MatchAnnot?

#8 52teth opened 8 years ago
1
MatchAnnot does not seem to support annotations of pseudogene or lincRNAs

#7 slowsmile opened 8 years ago
2
RuntimeError ('chromosome %s not in annotation' % chr)

#6 ls233 opened 8 years ago
6
matchAnnot error on genome with scaffolds

#5 atulkakrana opened 8 years ago
2
clusterView Error

#4 yuanyongxian opened 9 years ago
5
summary disagree with annotation entries?

#3 ls233 closed 9 years ago
3
Error reading SAM file

#2 atulkakrana closed 9 years ago
1
How to Run clusterView?

#1 ls233 closed 9 years ago
0