TranslatorSRI / Babel

Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
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Glimepiride has a long chemical name despite the alternate label algorithm #289

Open gaurav opened 5 months ago

gaurav commented 5 months ago

https://nodenormalization-sri.renci.org/1.4/get_normalized_nodes?curie=CHEBI%3A92609&conflate=true&drug_chemical_conflate=false&description=false

This is because it's a chemical whose CHEBI name is a long chemical name, but whose PUBCHEM.COMPOUND/MESH/HMDB labels are much easier to read. Maybe we need to tweak our preference order?

"equivalent_identifiers": [
      {
        "identifier": "CHEBI:92609",
        "label": "4-ethyl-3-methyl-N-[2-[4-[[[(4-methylcyclohexyl)amino]-oxomethyl]sulfamoyl]phenyl]ethyl]-5-oxo-2H-pyrrole-1-carboxamide"
      },
      {
        "identifier": "PUBCHEM.COMPOUND:3476",
        "label": "Glimepiride"
      },
      {
        "identifier": "CHEMBL.COMPOUND:CHEMBL149223",
        "label": "CHEMBL149223"
      },
      {
        "identifier": "MESH:C057619",
        "label": "glimepiride"
      },
      {
        "identifier": "CAS:261361-60-8"
      },
      {
        "identifier": "CAS:684286-46-2"
      },
      {
        "identifier": "CAS:93479-97-1"
      },
      {
        "identifier": "HMDB:HMDB0014367",
        "label": "Glimepiride"
      },
      {
        "identifier": "KEGG.COMPOUND:C07669"
      },
      {
        "identifier": "INCHIKEY:WIGIZIANZCJQQY-UHFFFAOYSA-N"
      },
      {
        "identifier": "UMLS:C0061323",
        "label": "glimepiride"
      },
      {
        "identifier": "RXCUI:25789"
      }