TranslatorSRI / Babel

Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
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How do we deal with the different types of insulin? #327

Open gaurav opened 1 month ago

gaurav commented 1 month ago

See e.g. https://nodenorm.test.transltr.io/1.5/get_normalized_nodes?curie=PUBCHEM.COMPOUND%3A118984454&curie=PUBCHEM.COMPOUND%3A16137271&curie=PUBCHEM.COMPOUND:24839622&conflate=true&drug_chemical_conflate=true&description=false

Might want to distinguish between biological and chemicals (e.g. insulin beef vs synthetic insulins)

gaurav commented 1 month ago

Other possible:

gaurav commented 1 month ago

Some examples of Translator queries with lots of insulins:

Gwenlyn reports that a bunch of these are UMLSes that aren't properly combined into the corresponding CHEBI terms.

gaurav commented 1 month ago

Reported to Feedback at https://github.com/NCATSTranslator/Feedback/issues/892#issuecomment-2265741565