Update 20240520

[erinyoung]

Moderate update

• "under the hood" uses some different channels because sometimes spades doesn't fail, but then also doesn't create a consensus fasta file
• updates panaroo to 1.5.0
• updates iqtree2 to 2.3.1
• updates mlst to 2.23.0-2024-05-01
• updates amrfinder to 3.12.8-2024-05-02.2
• updates datasets to 16.15.0

[erinyoung]

Replaces https://github.com/UPHL-BioNGS/Grandeur/pull/198

[erinyoung]

Closes https://github.com/UPHL-BioNGS/Grandeur/issues/200 Closes https://github.com/UPHL-BioNGS/Grandeur/issues/199