UPHL-BioNGS / Grandeur

UPHL's Reference Free Pipeline
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Add Yersinia reference strains to grandeur_ref #203

Closed DrB-S closed 2 months ago

DrB-S commented 3 months ago

Please add Yersinia enterocolitica, Y. pestis, and Y. pseudotuberculosis genomes to grandeur_ref. When I ran Grandeur on several Yersinia strains, the mash & fastani tools retrieved Serratia as the closest relative, presumably from grandeur_ref.

Here is the Y. enterocolitica strain: GCF_025758635.1_ASM2575863v1_genomic.fna

NZ_CP107102.1 Yersinia enterocolitica strain NW56 chromosome