UTHealth-CCB clamp-support issues

UTHealth-CCB / clamp-support

Clinical Language Annotation Modeling and Processing toolkit

http://clamp.uth.edu/

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issues

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OMOPEncoder: "this.term_parser" is null when using CLAMP_WIN 1.6.6 pipeline jar in ClampCmd_1.6.6

#76 dax-westerman opened 2 years ago
1
Regex NER parsing error

#75 jianlins opened 2 years ago
0
Oracle JDBC error

#74 doctorkermit opened 2 years ago
0
Negation NegEx not working as expected

#73 aflwong opened 2 years ago
0
Demo on website does not work!

#72 silstone opened 3 years ago
0
Which version of UMLS is CLAMP linked to?

#71 griff4692 opened 3 years ago
1
Exporting annotated entities in table form

#70 yvonne10 opened 3 years ago
1
Annotation options

#69 yvonne10 closed 3 years ago
2
UMLS component, new authentication strategy

#68 dax-westerman opened 3 years ago
15
typedef.xml Failed to create the part's controls error

#67 gitrach opened 3 years ago
1
NegEx doesn't seem to work for me

#66 aflwong closed 3 years ago
2
How to report relax F1 score for NER

#65 bugface closed 3 years ago
0
Alcohol Detection

#64 arkavb opened 4 years ago
0
DF_Regular_expression_NER not working for me with the default Regular Expression FIle.

#63 mgurley opened 4 years ago
0
Error "Could not find or load main class clamp.license.control.CmdOnlineActivator" when run ./activation.sh

#62 liuzi closed 4 years ago
4
How can I clean all the recognized entities for a section?

#61 abrac692 opened 4 years ago
0
Does the compare file function give me score for relations?

#60 abrac692 opened 4 years ago
0
for date recognization, should I train a model for it? what is the easiest way?

#59 nicole110 opened 4 years ago
1
If I have millions of notes, how can I use CLAMP.

#58 sharon83226 opened 4 years ago
5
Is there any documentation about how to use ruta rules in pipeline?

#57 nicole110 opened 4 years ago
1
Is there a document that has the recommended number of training files need for a good corpus training?

#56 abrac692 opened 4 years ago
1
Is there any classifiers for the type of note(e.g., discharge notes, radiology report)

#55 svg-isabel opened 4 years ago
0
i

#54 clampnlp closed 4 years ago
0
Have a large file of about 1000 notes, do we need to convert each patient note into a txt file or we can do for the whole file?

#53 svg-isabel opened 4 years ago
1
Adding rules to my pipeline

#52 Medical-NLP opened 4 years ago
0
customize pipelines inside clamp

#51 Healthcarenlp opened 4 years ago
1
Can I use my own indexing instead of the UMLS encoder?

#50 svg-isabel opened 4 years ago
0
How to assign relation a name?

#49 sharon83226 opened 4 years ago
1
Can I customize the sentence splitter?

#48 abrac692 opened 4 years ago
0
CLAMP License Question

#47 rwwarren closed 4 years ago
2
CLAMP Java 11 & 13 support

#46 rwwarren opened 4 years ago
6
How to synchronize files between team members with CLAMP GUI?

#45 svg-isabel opened 4 years ago
0
What is the difference between the Clamp cancer version and GUI version

#44 codebee2020 closed 4 years ago
1
negation does not show

#43 nicole110 opened 4 years ago
1
I have a xmi file, with annotated relations and entities. However, it can not visualize all the relations in xmi files.

#42 Phebee-eng opened 4 years ago
0
What do the attribute labels of disorders stand for

#41 Medical-NLP opened 4 years ago
0
relation doesn't show in the visualization

#39 sharon83226 opened 4 years ago
1
Use annotations from other tools in Clamp

#35 Medical-NLP closed 4 years ago
4
renaming project name

#34 nicole110 opened 4 years ago
1
CLAMP website typo

#33 rwwarren opened 4 years ago
1
[ClampCmd_1.6.0] 'illegal access' Error

#32 MenggeZhao closed 4 years ago
2
modifier included as a part of entity

#31 cshukai opened 4 years ago
0
Entity annotation issue: unable to select an entity when there is a sub-type added to the said entity

#30 gxiong100 opened 5 years ago
1
Clamp not Launching

#29 xiaoteng-m closed 5 years ago
2
Reference table of annotation

#28 JianhengHou opened 5 years ago
0
CLAMP can not run the Ruta Rules for predicting the relationships

#27 ghost opened 5 years ago
1
Missing the UMLS Component

#26 salshukri opened 5 years ago
1
UMLS user name input with quotes

#25 aegururaj opened 5 years ago
0
Mapping to UMLS

#24 acc4012 opened 5 years ago
0
Error when running CLAMP 1.5.0 built-in medication-attribute pipeline

#23 ghost opened 5 years ago
0