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UWB-Biocomputing
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WorkBench
Software and data provenance management platform for simulations of dissociated cortical cultures.
https://uwb-biocomputing.github.io/WorkBench/
Apache License 2.0
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Bump org.eclipse.jgit:org.eclipse.jgit from 4.9.0.201710071750-r to 6.6.1.202309021850-r in /WorkbenchProject
#136
dependabot[bot]
opened
1 year ago
0
Remember last sim
#135
BenYang2002
opened
1 year ago
1
Cache user
#134
BenYang2002
closed
1 year ago
3
Bump jackson-databind from 2.9.10.7 to 2.12.7.1 in /WorkbenchProject
#133
dependabot[bot]
opened
1 year ago
0
Bump jackson-databind from 2.9.10.7 to 2.13.4.1 in /WorkbenchProject
#132
dependabot[bot]
closed
1 year ago
1
Modify Neuron Layout Editor (NEdit) to generate graphml files
#131
stiber
opened
2 years ago
0
Bump jackson-databind from 2.9.10.7 to 2.12.6.1 in /WorkbenchProject
#130
dependabot[bot]
closed
1 year ago
1
Bump jsch from 0.1.51 to 0.1.54 in /WorkbenchProject
#129
dependabot[bot]
opened
2 years ago
0
documentation
#128
vikv1
opened
2 years ago
0
added the login and examples
#127
viaduct12
closed
2 years ago
0
added the instructions and os dockerfile
#126
viaduct12
closed
2 years ago
0
Added docker files and instructions
#125
viaduct12
closed
2 years ago
0
changed uploadFile to recordFile
#124
viaduct12
closed
2 years ago
0
changed the repository location to use https instead of ssh
#123
viaduct12
closed
2 years ago
0
Put together a canned demo starter
#122
stiber
opened
2 years ago
0
Need to patch log4j
#121
stiber
opened
2 years ago
0
Bump jackson-databind from 2.9.10.7 to 2.9.10.8 in /WorkbenchProject
#120
dependabot[bot]
closed
2 years ago
1
Rework Simulation Runtime Environment window so it has a progress bar
#119
king-shak
opened
2 years ago
0
Review what provenance should be recorded for the software agent nodes?
#118
king-shak
opened
2 years ago
0
ConnStatic template file needs to be updated
#117
king-shak
opened
2 years ago
0
DynamicLayout template file needs to be updated.
#116
king-shak
opened
2 years ago
0
Nesting of STDPgap parameter in AllSTDPSynapses and AllDynamicSTDPSynapses template files needs to be updated
#115
king-shak
opened
2 years ago
0
Convert Netbeans UI elements to something more maintainable
#114
stiber
opened
2 years ago
0
UI Should Scale
#113
king-shak
opened
2 years ago
0
Workbench Transition from Supporting BrainGrid to Graphitti.
#112
king-shak
closed
2 years ago
2
make class selector dynamic
#111
pali-r
opened
2 years ago
1
Put directory structure in the wiki
#110
stiber
closed
2 years ago
4
Add branch selector to the script specification dialog
#109
stiber
opened
2 years ago
0
Updated README to include Zenodo DOI at top
#108
king-shak
closed
2 years ago
1
Do Workbench releases get a DOI from Zenodo?
#107
stiber
closed
2 years ago
2
Added contributing guide
#106
stiber
closed
2 years ago
0
Write up CONTRIBUTING.md
#105
stiber
closed
2 years ago
0
Make class selector dynamic
#104
stiber
opened
3 years ago
3
Document programmer workflow for adding/modifying class in Graphitti
#103
stiber
closed
2 years ago
0
Make name tag values more user friendly
#102
stiber
closed
2 years ago
0
Bump jena-core from 3.3.0 to 4.2.0 in /WorkbenchProject
#101
dependabot[bot]
closed
3 years ago
3
Added implementation details about nodes spacing out in ProVis to Workbench docs
#100
king-shak
closed
3 years ago
1
Move over to working with Graphitti simulator
#99
stiber
closed
2 years ago
0
Create GitHub action for style checking
#98
stiber
opened
3 years ago
0
Directory structure update
#97
stevecl5
closed
3 years ago
2
Develop a more vanilla redrawing method for ProVis
#96
king-shak
opened
3 years ago
0
Nodes should automatically stop spacing out in ProVis
#95
king-shak
opened
3 years ago
1
Add this workflow outline to GitHub pages
#94
stiber
closed
2 years ago
0
Add support for HDF5 simulation results file
#93
stevecl5
opened
3 years ago
0
Implement intermediate directory structure
#92
stevecl5
closed
3 years ago
1
ProVis Fixes
#91
king-shak
closed
3 years ago
3
ProVis is missing provenance nodes from local simulations
#90
stevecl5
opened
3 years ago
0
Clean up Workbench directory structure
#89
stevecl5
closed
3 years ago
6
Collect SW provenance directly from github, rather than cloning repo
#88
stiber
opened
3 years ago
1
Figure out a way to embed the commit ID into simulator code
#87
stiber
closed
3 years ago
1
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