Does the output of ASCAT use a 0-based or a 1-based coordinate system?

[xieduo7]

Specifically, does the 'startpos' column in the '*.segments.txt' output file start counting positions from 0 or 1?

Thank you!

[tlesluyes]

Hi @xieduo7,

The output (both startpos and endpos) is 1-based.

Cheers,

Tom.