issues
search
ViennaRNA
/
forna
Create force-directed graphs of RNA secondary structures.
Apache License 2.0
100
stars
31
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
A stepwise protocol for running Forna locally on Linux (suit for c5a911f on Dec 2, 2015)
#52
fzc1997
opened
1 year ago
0
make install error: cannot import name '_RNA' from partially initialized module 'RNA'
#51
gprezza
closed
1 year ago
1
ERROR (0) - undefined
#50
nbrittain
opened
1 year ago
0
The backbone of 1st structure does not move when display multiple structures with applyForce = True option
#49
LeKhang97
opened
2 years ago
0
Enable HTTPS for the API
#48
Benjamin-Lee
opened
3 years ago
1
Installation issue for MacOs
#47
CindyWXQ
opened
3 years ago
1
Installation for mac issue
#46
Nick-nale
opened
3 years ago
1
`from werkzeug.middleware.proxy_fix import ProxyFix` needed?
#45
porteusconf
opened
4 years ago
0
Python 3 support and some fixes
#44
mmferrari
opened
4 years ago
0
skip 0 index for negative start indices
#43
martin-raden
opened
4 years ago
0
update forna.py code based on updated forgi library
#42
hongbo-zhu-cn
closed
5 years ago
2
Dot-Bracket format
#41
suryachinnaraj
closed
5 years ago
1
Submitting molecule doesn't work with forgi 1.1.0 while running locally
#40
youri-c
opened
6 years ago
3
Pass export file name
#39
eggzilla
opened
6 years ago
6
Installation issue
#38
ko-ala
closed
6 years ago
15
Add the name of the molecule
#37
pkerpedjiev
opened
7 years ago
0
custom numbering
#36
martin-raden
opened
7 years ago
0
wrong width/height ratios due to missing radius
#35
martin-raden
closed
7 years ago
4
Ability to display RNA duplexes
#34
tfenne
opened
7 years ago
0
How to cite?
#33
mnori
closed
8 years ago
2
Make custom coloring ranges molecule-specific
#32
pkerpedjiev
opened
9 years ago
0
Add legend for custom coloring
#31
pkerpedjiev
opened
9 years ago
0
Open help in a new window
#30
pkerpedjiev
opened
9 years ago
0
Visualising non-canonical RNA basepairs
#29
AntonPetrov
opened
9 years ago
0
deltaG
#28
domste
opened
9 years ago
0
Missing LICENCE information
#27
peterjc
closed
7 years ago
2
Toggle node fill, stroke, text from a checkbox dropup
#26
pkerpedjiev
closed
9 years ago
0
create Graph to Sequence and Dot Bracket function
#25
j-4
closed
9 years ago
0
Adding a loading indicator for the pdb files
#24
pkerpedjiev
closed
9 years ago
1
keep button on top right in one row
#23
j-4
closed
9 years ago
0
Use key for binding the node data like we do for the link data
#22
j-4
closed
9 years ago
0
Track the center of the molecule with the viewport
#21
j-4
closed
9 years ago
0
Stop animation buttons or keys
#20
j-4
closed
9 years ago
1
Add output in jpg, pdf, and ps format.
#19
pkerpedjiev
closed
9 years ago
0
Ignore whitespace in the input sequences
#18
pkerpedjiev
closed
9 years ago
1
Option for displaying CIRCULAR molecules
#17
j-4
closed
10 years ago
1
Add new molecule next to the existing ones, rather than on top.
#16
pkerpedjiev
closed
9 years ago
0
Show nucleotide positions in grey in the input screen
#15
pkerpedjiev
closed
9 years ago
0
use localStorage to store the current state of forna
#14
j-4
closed
9 years ago
0
Create simple API using url encoded data
#13
j-4
closed
9 years ago
0
Don't allow sequence/structure input box to be expanded beyond the tab.
#12
pkerpedjiev
closed
10 years ago
0
mouse on a nucleotide should display the nucleotide number
#11
pkerpedjiev
closed
9 years ago
1
Expand to fill the entire browser window
#10
pkerpedjiev
closed
9 years ago
0
Draw main suboptimal structures
#9
pkerpedjiev
closed
9 years ago
0
Add RNA from refseq Database
#8
j-4
closed
9 years ago
0
Kinfold Trajectory simulation
#7
j-4
closed
9 years ago
0
Color according to Pair Probabilities
#6
j-4
closed
9 years ago
0
Add a "Center Molecule" button
#5
j-4
closed
9 years ago
1
Taint check input json
#4
j-4
closed
10 years ago
0
Redesign User Interface and added About Dialog
#3
j-4
closed
10 years ago
0
Next