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Assessing-Variant-Calling-Pipelines-Mini-Project
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Project Roadmap
#4
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Wangari-Joyce
opened
2 years ago
okeyoallan
commented
2 years ago
This road map is a summary of a work plan we intend to adopt to be able to achieve our goals for the project.
We have provided an outline of the milestones that will guide us through this project duration.
This road map is bound to modification as well as customization.
Wangari-Joyce
commented
2 years ago
1. Understand the basics
What genetic variation is and the various types of genetic variations
Understand what variant calling is
Understand the importance of variants
2. Assessing variant calling pipelines
Understand the existing variant calling pipelines
Understand the various types of file inputs and outputs and make interpretations therein
Understand various tools used for variant calling
Familiarize with the various workflow languages
Identify the gaps in the existing pipelines and fill them
Develop a standardized variant calling workflow
3. Performance record
Comprehensively document our work: outline each day task and review our weekly achievement
Use wiki and github pages to document our work
Provide periodic updates on the project progress (code reviews)
Write a comprehensive report on the whole project and present our findings
4. Mentorship
Seek help and guidance from our Mentors and the entire team
5. Work ethic
Collaborate positively and effectively with each other
6. Skills development
Develop excellent writing skills
Develop excellent communication skills
Develop excellent presentation skills
Wangari-Joyce
commented
2 years ago
updated the roadmap