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WormBase
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genedesc_generator
Automated gene descriptions generator for model organism databases
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When including qualifiers for GO MF and CC sentences, exclude non-experimental evidence code based annotaions
#18
rankishore
closed
5 years ago
0
Writing descriptions for information poor C. elegans genes
#17
rankishore
closed
5 years ago
0
Create orthology module
#16
valearna
closed
5 years ago
2
GO module: Load orthology file for species of interest
#15
valearna
closed
5 years ago
0
create file with list of gene IDs for each class label from WB API
#14
valearna
closed
5 years ago
1
convert config file to YAML
#13
valearna
closed
6 years ago
0
Postfix phrases for GO terms
#12
rankishore
closed
6 years ago
0
generate reports with number of terms per gene, length of term names, and number of genes without GO sentences
#11
valearna
closed
6 years ago
1
generate logs for parent-child and other transformations
#10
valearna
closed
6 years ago
0
work on column 16 go data
#9
valearna
opened
6 years ago
1
Using common ancestor for GO terms
#8
valearna
closed
6 years ago
3
Prefix phrases for GO terms
#7
rankishore
closed
6 years ago
0
For each evidence group (and aspect), keep the most granular GO term
#6
rankishore
closed
6 years ago
1
Replacement rules for GO terms
#5
rankishore
closed
6 years ago
1
AGR gaf files are not standard
#4
valearna
closed
6 years ago
1
convert configuration file from .ini to json
#3
valearna
closed
6 years ago
0
priority list for evidence groups
#2
valearna
closed
6 years ago
1
Rule for exclusion list for MF GO terms
#1
rankishore
closed
6 years ago
1
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