Data Description

Two in-house private datasets: pelvic and brain and one public dataset: fastMRI are utilized in our experiments. For the private data, all studies have been approved by the local Institutional Review Board (IRB). The IRB asked us to protect the privacy of participants and to maintain the confidentiality of data. Since we cannot make the two datasets publicly available, we won't claim them as our contribution.

Environment and Dependencies

Requirements:

• Python 3.6
• Pytorch 1.4.0
• scipy
• scikit-image
• opencv-python
• tqdm

Our code has been tested with Python 3.6, Pytorch 1.4.0, torchvision 0.5.0, CUDA 10.0 on Ubuntu 18.04.

To Run Our Code

• Train the model

  python train_demo.py

• Test the model

  python test_demo.py --resume ' '

  where --resume trained model.