YoannPa methview.qc issues

YoannPa / methview.qc

HM450.QCView allows you to generate quality control plots from your Human Methylation 450K dataset.

GNU General Public License v3.0

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issues

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Legends of devscore.heatmap() are not left aligned to each other

#16 AnjaCaRa closed 3 years ago
3
sampleQC.biplot() - Error in [.data.table(loadings.data, , :=(2:3, lapply(X = data.table::.SD, :

#15 AnjaCaRa closed 3 years ago
1
devscore.heatmap() - Error in unique.default(x, nmax = nmax) : unique() applies only to vectors

#14 AnjaCaRa closed 3 years ago
1
plot.all.qc() - Error in unique.default(x, nmax = nmax)

#13 AnjaCaRa closed 3 years ago
4
Legends of snp.heatmap() are not left aligned to each other

#12 AnjaCaRa closed 3 years ago
3
Validate HM450K QC data with WGBS data to better define the reference for QC fluorescence intensity

#11 YoannPa closed 1 year ago
0
snp.heatmap() - scale color bar title shows "Methylation" when it should be allelic version of SNPs

#10 AnjaCaRa closed 3 years ago
2
Overlap annotation legends snp.heatmap()

#9 AnjaCaRa closed 3 years ago
6
Group label size snp.heatmap() - annotation labels overlap

#8 AnjaCaRa closed 3 years ago
3
plot.all.qc(include.gp = TRUE) - add documentation details about snp.heatmap() to custom genotyping probe heatmap

#7 AnjaCaRa closed 3 years ago
1
plot.all.qc(include.gp = TRUE) - display issue with legends and sample labels.

#6 AnjaCaRa closed 3 years ago
8
snp.heatmap() function error

#5 AnjaCaRa closed 3 years ago
1
target.biplot() error

#4 AnjaCaRa closed 3 years ago
1
sampleQC.biplot() PCA function error

#3 AnjaCaRa closed 3 years ago
3
QC summary by sample

#2 AnjaCaRa closed 3 years ago
2
Error for plot.all.qc() function after update

#1 AnjaCaRa closed 3 years ago
0