YosefLab / ImpulseDE2

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ImpulseDE2

Differential expression analysis of longitudinal count data sets

ImpulseDE2 is a differential expression algorithm for longitudinal count data sets which arise in sequencing experiments such as RNA-seq, ChIP-seq, ATAC-seq and DNaseI-seq.

INSTALLATION

Clone the GitHub repository first into you local target directory and then install the package via "R CMD INSTALL .".

VIGNETTE

View the vignette (.html) in your browser by double clicking on "vignettes/ImpulseDE2_Tutorial.html".