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YosefLab
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VISION
Signature Analysis and Visualization for Single-Cell RNA-seq
https://yoseflab.github.io/VISION/
MIT License
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Error with vision Seurat object
#136
mangochiral
opened
1 month ago
1
Creating a Vision object from SeuratV5 object
#135
shp62
opened
1 month ago
0
Error in if (tolower(filter) == "novar") { : missing value where TRUE/FALSE needed
#134
Moonerss
opened
1 month ago
0
Error in x$consistency : $ operator is invalid for atomic vectors
#133
yfei-w
opened
2 months ago
0
Remove loe dependency (no longer used)
#132
deto
closed
2 months ago
1
Errors during package installation
#131
jasoncrucify
closed
2 months ago
4
loe dependency no longer on CRAN?
#130
bbimber
closed
2 months ago
1
Loading multiple gmt files
#129
kiwipeel
opened
3 months ago
0
Update Signatures.Rmd
#128
Yanay1
opened
6 months ago
0
Meaning of negative signature scores
#127
alievakrash
opened
11 months ago
0
"Issues Encountered During Installation of Packages from Both GitHub and Local Sources"
#126
DaXuanGarden
opened
1 year ago
2
Error: undefined columns selected
#125
jordanwhitlock
opened
1 year ago
0
Having problem to install the package
#124
khojandin
opened
1 year ago
1
runHotspot
#123
snguyen268
opened
1 year ago
0
about DE function in web browser
#122
rahhhm
opened
1 year ago
0
Issue with analyze() - Error in colRanks
#121
seankodani
closed
1 year ago
15
Typo in NAMESPACE
#120
akhmelevskaya
opened
2 years ago
2
R crashes after analyze(vision) - fitting ...
#119
rmicheroli
opened
2 years ago
8
DataTables warning
#118
FSHvbs
opened
2 years ago
0
Changed to legacy constructor hotspot
#117
Yanay1
closed
2 years ago
0
Update hotspot install in docs
#116
adamgayoso
opened
2 years ago
1
Add download button for heatmap signature data
#115
Yanay1
opened
2 years ago
0
Issue after Bioconductor upgrade
#114
igrisch
opened
2 years ago
1
added seurat import in data handler
#113
mattjones315
opened
2 years ago
0
Error in Reductions(obj) : could not find function "Reductions"
#112
bbimber
opened
2 years ago
5
Add ‘phytools’ dependency
#111
bbimber
closed
2 years ago
0
Installation requires a package that cannot be found...
#110
SathiyaNManivannan
closed
2 years ago
2
implemented entropy calculation into user report
#109
mattjones315
closed
2 years ago
0
New phylovision vignette
#108
mattjones315
closed
2 years ago
2
Add download button to UI
#107
Yanay1
closed
2 years ago
0
Trouble visualizing signature enrichments.
#106
tcswarbear
closed
2 years ago
1
Question regarding signatures and 'COMP' of latent space.
#105
Jeongwoola
closed
2 years ago
1
Sc plasticity
#104
mattjones315
closed
2 years ago
0
Add Seurat DE Tests
#103
Yanay1
closed
2 years ago
0
Determine which metaData can run (factor numbers over 50)
#102
lysokine
opened
2 years ago
0
creating signature
#101
Laurent2873
opened
2 years ago
4
Is there a way to change perplexity?
#100
breelege
closed
2 years ago
2
Error in data.frame(C = consistency, pValue = pvals, FDR = fdr)？
#99
duocang
opened
2 years ago
7
Fix NAs cells in DE from selections
#98
Yanay1
closed
2 years ago
0
Error in for (filename in filenames) { : invalid for() loop sequence
#97
duocang
closed
3 years ago
0
Signature Score Labelling metadata output
#96
CisnerosFernandez
closed
3 years ago
2
Adding server API documentation
#95
deto
closed
3 years ago
0
Doesn't connect to server
#94
AntiBodyQn
opened
3 years ago
1
LCA based cluster + code clean up
#93
Yanay1
closed
3 years ago
2
Get top 10 enriched pathways per seurat assigned cluster
#92
danmoore1987
closed
3 years ago
1
Different hallmark pathways are yielding the exact same results
#91
xihuiyin
closed
3 years ago
2
Compare Branches
#90
Yanay1
opened
3 years ago
1
PhyloVis PR
#89
Yanay1
closed
3 years ago
2
installation error
#88
yxiao832
closed
3 years ago
1
[Feature Request] Tutorial on how to export pools to CSV
#87
AlexKhodaverdian
opened
3 years ago
1
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