YosefLab / scone

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allow non-default BPPARAM #62

Closed allonw closed 8 years ago

allonw commented 8 years ago

To allow a user to limit scone's core usage in multicore or to register a cluster

Add BPPARAM=my_BPPARAM to every use of bplapply etc. and add my_BPPARAM=bpparam() to the function definition as recommended in biocparallel

drisso commented 8 years ago

This is now implemented in develop (commit cdff261251d145c4dd2cae67660a20f5f320a65d). By default, i.e., if no bpparam is specified, it uses the value of registered().