SCONE (Single-Cell Overview of Normalized Expression), a package for single-cell RNA-seq data quality control (QC) and normalization. This data-driven framework uses summaries of expression data to assess the efficacy of normalization workflows.
We recommend installation of the package via bioconductor.
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("scone")
Usually not recommended. To download the development version of the package, use
BiocManager::install("YosefLab/scone")
You can download the latest release of SCONE for R 3.3 here. This is useful only for reproducing old results.