YuLab-SMU enrichplot issues

YuLab-SMU / enrichplot

Visualization of Functional Enrichment Result

https://yulab-smu.top/biomedical-knowledge-mining-book/

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issues

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Comparecluster Emapplot Pie Node Size Error

#301 mj-kamal opened 1 day ago
0
New Emapplot Error when plotting

#300 mj-kamal opened 2 days ago
4
Building a network CNETplot

#299 lucianalef20 opened 1 week ago
1
Ridgeplot does not work when selecting a specific gene set and plotting non-core genes

#298 LinearParadox closed 2 weeks ago
0
goplot error with R 4.4

#297 mhasoon closed 1 month ago
8
using `ggsave` after `gseaplots2` inside a function doesn't create the correct plot.

#296 yeroslaviz closed 3 weeks ago
3
Enrichplot Error if Get Set Identifiers Used

#295 DarioS closed 2 weeks ago
3
How can we customize the color in the dotplot? I want to use the color from the darjeeling1 palette.

#294 rachanapandey250 opened 2 months ago
2
How to show labels for several selected genes

#293 reliejiayou closed 2 weeks ago
11
Space Layout and Concept Networks display grouping legend I can't remove

#292 CarolynBluemcke opened 2 months ago
19
merge_result not compatible with pairwise_termsim

#291 nina-hahn closed 2 months ago
10
showCategory function throwing error within ridgeplot

#290 ankurnaqib closed 3 months ago
3
cnetplot show GO terms and I would like to use description

#289 IrelCM closed 3 weeks ago
10
Ridgeplot Draws Empty Rows

#288 DarioS opened 3 months ago
2
Textbook Lacks Important Details

#287 DarioS opened 3 months ago
0
Textbook barplot Links to Wrong R Package

#286 DarioS opened 3 months ago
0
How to set range of p.adjust in dotplot?

#285 agriswold76 opened 3 months ago
2
Problem in cnetplot visualisation

#284 abhilashdasari opened 3 months ago
0
Could we add FDR or p value of each gene for enrichplot?

#283 Chrisdoan9 closed 2 months ago
2
how can i change the colour of category node of my own choice in cnetplot

#282 Sidragull57 opened 4 months ago
1
Why cnetplot work with some pathways from MSigDb but not for others?

#281 Chrisdoan9 closed 4 months ago
8
fortify bugfix for duplicated descriptions with unique IDs

#280 j-andrews7 closed 4 months ago
1
`pairwise_termsim` error on `compareClusterResult` object when ID descriptions are duplicated

#279 j-andrews7 closed 4 months ago
0
change edge color in cnetplot

#278 gqhhh opened 4 months ago
1
p.adjust value not being rounded in `dotplot`

#277 lucygarner opened 5 months ago
1
Use this package with Seurat?

#276 jcasadogp opened 6 months ago
1
gene name in cnetplot--with own GO annotation data

#275 kersng opened 6 months ago
2
How can I change the width of each coloum in the heatmap in the treeplot?

#274 CyrusWang57 opened 6 months ago
0
The shape of the point changed when combining two dotplot figures into one figure.

#273 ppdpg opened 7 months ago
4
compareCluster dotplot: how to modify the genesets order

#272 luciechanvillard opened 7 months ago
1
Fractional Genes

#271 DarioS closed 4 weeks ago
3
dotplot shows only one term

#270 lbwfff closed 8 months ago
2
pairwise_termsim Throws Error if No Significant Gene Sets

#269 DarioS opened 8 months ago
4
unexpected change of default colors/theme with enrichplot

#268 adalgarno opened 10 months ago
7
add color setting for add_node_label function

#267 yiluyucheng closed 2 weeks ago
2
enhancement: cnetplot gene vs gene set node aesthetics customization

#266 kimsjune closed 2 weeks ago
1
adjust the JC similarity method

#265 xiangpin closed 11 months ago
0
why does my treeplot only appear partially?

#264 chansigit opened 11 months ago
2
fix `ridgeplot(showCategory = a_vector_of_terms)`

#263 huerqiang closed 11 months ago
0
gseaScores()

#262 ybaeus closed 1 year ago
1
emapplot and cnetplot customization (compareCluster)

#261 plcardozo opened 1 year ago
5
Fix treeplot()

#260 huerqiang closed 1 year ago
0
Treeplot + group label reordering

#259 BaylorSci closed 1 year ago
4
Help with the new gradient colors

#258 Shashankti closed 1 year ago
3
show all nodes but show select labels in emapplot

#257 SMM02 opened 1 year ago
3
fix aes value of dotplot

#256 huerqiang closed 1 year ago
0
change default color: from c("red", "blue") to c("#e06663", "#327eba")

#255 huerqiang closed 1 year ago
3
using `check_installed` to check the pkg in some functions

#254 xiangpin closed 1 year ago
0
Feature Request: Enhancements for cnetplot Function in enrichplot Package

#253 jacobHog closed 3 weeks ago
1
Upsetplot Question

#252 jordlang01 opened 1 year ago
0