YuLab-SMU enrichplot issues

YuLab-SMU / enrichplot

Visualization of Functional Enrichment Result

https://yulab-smu.top/biomedical-knowledge-mining-book/

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issues

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using `ggsave` after `gseaplots2` inside a function doesn't create the correct plot.

#296 yeroslaviz opened 1 week ago
2
Enrichplot Error if Get Set Identifiers Used

#295 DarioS opened 1 week ago
2
How can we customize the color in the dotplot? I want to use the color from the darjeeling1 palette.

#294 rachanapandey250 opened 1 week ago
2
How to show labels for several selected genes

#293 reliejiayou opened 1 week ago
1
Space Layout and Concept Networks display grouping legend I can't remove

#292 CarolynBluemcke opened 3 weeks ago
8
merge_result not compatible with pairwise_termsim

#291 nina-hahn closed 1 month ago
10
showCategory function throwing error within ridgeplot

#290 ankurnaqib closed 1 month ago
3
cnetplot show GO terms and I would like to use description

#289 IrelCM opened 1 month ago
8
Ridgeplot Draws Empty Rows

#288 DarioS opened 1 month ago
2
Textbook Lacks Important Details

#287 DarioS opened 1 month ago
0
Textbook barplot Links to Wrong R Package

#286 DarioS opened 1 month ago
0
How to set range of p.adjust in dotplot?

#285 agriswold76 opened 1 month ago
2
Problem in cnetplot visualisation

#284 abhilashdasari opened 2 months ago
0
Could we add FDR or p value of each gene for enrichplot?

#283 Chrisdoan9 closed 1 month ago
2
how can i change the colour of category node of my own choice in cnetplot

#282 Sidragull57 opened 2 months ago
1
Why cnetplot work with some pathways from MSigDb but not for others?

#281 Chrisdoan9 closed 2 months ago
8
fortify bugfix for duplicated descriptions with unique IDs

#280 j-andrews7 closed 2 months ago
1
`pairwise_termsim` error on `compareClusterResult` object when ID descriptions are duplicated

#279 j-andrews7 closed 2 months ago
0
change edge color in cnetplot

#278 gqhhh opened 3 months ago
0
p.adjust value not being rounded in `dotplot`

#277 lucygarner opened 4 months ago
1
Use this package with Seurat?

#276 jcasadogp opened 4 months ago
1
gene name in cnetplot--with own GO annotation data

#275 kersng opened 4 months ago
2
How can I change the width of each coloum in the heatmap in the treeplot?

#274 CyrusWang57 opened 5 months ago
0
The shape of the point changed when combining two dotplot figures into one figure.

#273 ppdpg opened 5 months ago
4
compareCluster dotplot: how to modify the genesets order

#272 luciechanvillard opened 5 months ago
1
Fractional Genes

#271 DarioS opened 6 months ago
0
dotplot shows only one term

#270 lbwfff closed 6 months ago
2
pairwise_termsim Throws Error if No Significant Gene Sets

#269 DarioS opened 6 months ago
4
unexpected change of default colors/theme with enrichplot

#268 adalgarno opened 8 months ago
7
add color setting for add_node_label function

#267 yiluyucheng opened 9 months ago
0
enhancement: cnetplot gene vs gene set node aesthetics customization

#266 kimsjune opened 9 months ago
0
adjust the JC similarity method

#265 xiangpin closed 9 months ago
0
why does my treeplot only appear partially?

#264 chansigit opened 10 months ago
2
fix `ridgeplot(showCategory = a_vector_of_terms)`

#263 huerqiang closed 9 months ago
0
gseaScores()

#262 ybaeus closed 10 months ago
1
emapplot and cnetplot customization (compareCluster)

#261 plcardozo opened 11 months ago
5
Fix treeplot()

#260 huerqiang closed 11 months ago
0
Treeplot + group label reordering

#259 BaylorSci closed 11 months ago
4
Help with the new gradient colors

#258 Shashankti closed 11 months ago
3
show all nodes but show select labels in emapplot

#257 SMM02 opened 1 year ago
3
fix aes value of dotplot

#256 huerqiang closed 1 year ago
0
change default color: from c("red", "blue") to c("#e06663", "#327eba")

#255 huerqiang closed 1 year ago
3
using `check_installed` to check the pkg in some functions

#254 xiangpin closed 1 year ago
0
Feature Request: Enhancements for cnetplot Function in enrichplot Package

#253 jacobHog opened 1 year ago
0
Upsetplot Question

#252 jordlang01 opened 1 year ago
0
UseMethod("rescale") error using cnetplot() function

#251 lmanchon opened 1 year ago
5
Recolouring treeplot

#250 danphillips28 opened 1 year ago
1
Error in offspring.tbl_tree_item(.data = .data, .node = .node, tiponly = tiponly, : could not find function "offspring.tbl_tree_item"

#249 Leekate11 opened 1 year ago
3
Customizing the legend unit scale

#248 luka-svet closed 1 year ago
1
R-4.3.1: could not find function "offspring.tbl_tree_item"

#247 benben-miao opened 1 year ago
5