EntropySearch

Search spectral library with entropy similarity. Download the software from here: https://github.com/YuanyueLi/EntropySearch/releases. All the three major platforms (Windows, Linux, and MacOS) are supported.

If you found issues, please report them here: Issues.

If you find this package useful, please consider citing the following papers:

Li, Y., Fiehn, O., Flash entropy search to query all mass spectral libraries in real time. 04 April 2023, PREPRINT (Version 1) available at Research Square. https://doi.org/10.21203/rs.3.rs-2693233/v1

Li, Y., Kind, T., Folz, J. et al. Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification. Nat Methods 18, 1524–1531 (2021). https://doi.org/10.1038/s41592-021-01331-z

Note: The software is build with GitHub actions in Windows-2019 (Windows 10), Ubuntu-20.04 (Focal Fossa), and MacOS-11 (Big Sur). It should works in those platforms with similar versions or newer versions. If you want to build the software in other platforms, please download the source code and build it by yourself. A helper script build_linux.sh is provided for Linux and MacOS, build_win.bat is provided for Windows.

GUI