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ZainabKamel / NGS2-Project

This project is submitted in a partial fulfillment of the requirment of CIT-659 "NGS2" course for Nile University
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Trying to trim the availavle four samples we have using this command "trimmomatic+PE -threads 1 -phred33 -trimlog trimLogFile -summary statsSummaryFile $f1 $f2 $newf1 $newf1U $newf2 $newf2U \ ILLUMINACLIP:$adap/TruSeq3-PE.fa:2:30:10:1 SLIDINGWINDOW:4:15 MINLEN:36" and it didn't work #2

Closed ZainabKamel closed 4 years ago

ZainabKamel commented 4 years ago

we figured out it only works for paired reads, we still working on modification of it