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a-h-b
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binny
GNU General Public License v3.0
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Prokka's file writing problem
#62
Andyargueasae
closed
1 week ago
3
OSError: [Errno 39] Directory not empty: '/work/home/songbing/.cache/snakemake/snakemake/source-cache/runtime-cache/tmp9x52c7qu'
#61
B1991ing
opened
4 months ago
1
non-zero exit status 1
#60
B1991ing
opened
5 months ago
3
Module not found error for pandas
#59
Andyargueasae
opened
5 months ago
5
InstallError
#58
B1991ing
opened
7 months ago
17
Error: Network unreachable
#57
tfaitova1
opened
10 months ago
1
Depth calculation with the use of megahit
#56
Andyargueasae
opened
1 year ago
1
Sometimes indexerror
#55
Andyargueasae
closed
5 months ago
0
Failed to initiate the conda environment.
#54
Andyargueasae
opened
1 year ago
6
Binny has no bin produced for assembly with plastid contigs
#53
Andyargueasae
closed
1 year ago
0
After adding plastid markers, binny process errors
#52
Andyargueasae
closed
1 year ago
1
About changing database from default to customized
#51
Andyargueasae
closed
1 year ago
0
Test run processing id error
#50
Andyargueasae
closed
1 year ago
0
Get functional version of HDBSCAN again
#49
ohickl
closed
1 year ago
0
Error in test run
#48
Andyargueasae
closed
1 year ago
6
Error to finish testrun
#47
0819shumpeitakeuchi
closed
1 year ago
12
Batch job submission failed: Requested node configuration is not available
#46
Nathhub
closed
1 year ago
3
No bin file after analysis
#45
ywangbioinfo
opened
1 year ago
5
Binny step is slow and use a lot of RAM in large dataset
#44
kingtom2016
opened
1 year ago
6
Get functional Snakemake version
#43
ohickl
closed
1 year ago
0
Get functional HDBSCAN version
#42
ohickl
closed
1 year ago
0
Trying to produce bins
#41
jp589
closed
1 year ago
9
Test run completes, throws warnings and produces no bins
#40
btemperton
opened
1 year ago
2
Calling binny within an existing snakemake pipeline
#39
EisenRa
opened
1 year ago
2
Issue with TESTRUN
#38
jp589
closed
2 years ago
2
[nltk_data] Error
#37
joeyclancy
closed
1 year ago
14
Duplicate output file pattern in rule prepare_input_data
#36
palomo11
opened
2 years ago
2
Numpy error: libgfortran.so.5: invalid ELF header
#35
palomo11
closed
2 years ago
2
Sk v15
#34
ohickl
closed
2 years ago
0
Setting of multiple bam files of the IDBAUD co-assembly contig.fa
#33
B-1991-ing
opened
2 years ago
2
Ensure conda functionality
#32
ohickl
closed
2 years ago
0
Improve conda env channel order
#31
ohickl
closed
2 years ago
0
Update binny wrapper
#30
ohickl
closed
2 years ago
0
Update binny wrapper
#29
ohickl
closed
2 years ago
0
ModuleNotFoundError: No module named 'conda._vendor.auxlib'
#28
B-1991-ing
closed
2 years ago
105
Running binny in the PBS like system
#27
B-1991-ing
opened
2 years ago
0
Question on the installation of binny
#26
B-1991-ing
closed
2 years ago
15
Binny beta v0.50 multi bam v036
#25
a-h-b
closed
2 years ago
1
Errors when `6) Initialize conda environments:`
#24
Hocnonsense
closed
2 years ago
4
Workflow running error
#23
JaphethLin
closed
2 years ago
5
checkm_tf & checkm_pf
#22
JaphethLin
closed
2 years ago
4
Update binny_main.py
#21
ohickl
closed
2 years ago
0
Load compatible version of UniFunc (1.1) for Mantis 1.3 during install
#20
ohickl
closed
2 years ago
0
Multiple bam files from co-assembly?
#19
sjaenick
closed
2 years ago
3
Add output path variable to some binny functions and more spelling fi…
#18
ohickl
closed
2 years ago
0
Fix config
#17
ohickl
closed
2 years ago
0
Binny beta v0.50
#16
ohickl
closed
2 years ago
0
Binny_alpha_008:
#15
ohickl
closed
3 years ago
0
Adapt installation to new Mantis config format v2
#14
ohickl
closed
3 years ago
0
Adapt installation to new Mantis config format
#13
ohickl
closed
3 years ago
0
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