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a-r-j
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graphein
Protein Graph Library
https://graphein.ai/
MIT License
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[RNA Graphs] change relative imports
#35
a-r-j
closed
3 years ago
0
[Protein meshes] add base protein mesh functionality
#34
a-r-j
closed
3 years ago
0
Sequencing Annotation Functions in Higher-level API
#33
a-r-j
closed
3 years ago
0
RNA Graphs Functionality
#32
a-r-j
closed
3 years ago
0
[RNA Graphs] Added initial RNA graph API
#31
a-r-j
closed
3 years ago
1
[WIP] Add diffusion matrices
#30
ericmjl
closed
3 years ago
0
[INF] Introduce code style continuous integration checks
#29
ericmjl
closed
3 years ago
1
Refactor granularity kwarg in `protein.process_dataframe`
#28
ericmjl
opened
3 years ago
0
Process dataframe docstrings
#27
ericmjl
closed
3 years ago
2
Add support for PPI networks
#26
rvinas
closed
3 years ago
1
Create dictionary of non-standard amino acids
#25
ericmjl
closed
3 years ago
1
Protein featurization
#24
ericmjl
closed
4 years ago
2
Simplify environment.yml to minimal set of packages required
#23
ericmjl
closed
2 years ago
1
ImportError on Pytorch3d
#22
jasonshi10
closed
4 years ago
11
Contacts
#21
lerachel
closed
3 years ago
2
Merge Dev prior to refactoring process
#20
a-r-j
closed
4 years ago
0
Graphein Design Doc
#19
ericmjl
opened
4 years ago
13
Dev
#18
a-r-j
closed
4 years ago
0
Upgrade compatibility to DGL 0.5.0+
#17
a-r-j
closed
3 years ago
2
Installation
#16
lerachel
closed
3 years ago
5
Visualisation of Protein Graphs
#15
a-r-j
closed
3 years ago
3
Please fix construct_graph.py arguments
#14
lerachel
closed
4 years ago
1
Dataloaders for example datasets
#13
a-r-j
opened
4 years ago
0
Extended featurisation options
#12
a-r-j
opened
4 years ago
0
Structure-informed dataset splitting
#11
a-r-j
closed
1 year ago
0
[Package] Remove VMD from requirements. Best to install via conda
#10
a-r-j
closed
4 years ago
0
Dev
#9
a-r-j
closed
4 years ago
0
[Todo] Docker install
#8
a-r-j
closed
3 years ago
4
Atom graph to NX, PyG
#7
a-r-j
closed
3 years ago
0
Dev
#6
a-r-j
closed
4 years ago
0
Reformat docstrings to google format for sphinx compatibility
#5
a-r-j
closed
4 years ago
0
Dev
#4
a-r-j
closed
4 years ago
0
add datasets
#3
a-r-j
closed
4 years ago
0
update readme
#2
a-r-j
closed
4 years ago
0
Dev
#1
a-r-j
closed
4 years ago
0
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