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adoebley
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Griffin
A flexible framework for nucleosome profiling of cell-free DNA
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Running Griffin using different read depths
#18
Januaryyiyue
closed
1 month ago
1
griffin_merge_sites.py hangs and can't finish
#17
robinycfang
opened
5 months ago
3
How to make site_lists
#16
RetGiraffe11235
closed
1 month ago
2
chrX and chrY in GC mappability pipeline
#15
savarsinha123
closed
1 year ago
2
Running Griffin on TSS (follow-up)
#14
Irfanwustl
closed
1 month ago
5
Nucleosome profiling output files and directories are inconsistent with the README's expected results
#13
alanasweinstein
closed
1 year ago
1
Running Griffin on TSS
#12
Irfanwustl
closed
1 year ago
3
Added Giffin Dockerfile and instruction
#11
yueyaog
opened
1 year ago
0
Griffin Nucleosome Profiling Throws TypeError with Specific Configuration
#10
yueyaog
closed
1 year ago
2
Missing Script for Running 'griffin_filter_sites' Pipeline to Generate Sites File
#9
yueyaog
closed
1 year ago
2
GC Frequency Calculation error: 'chrom_sizes_dict' is not defined
#8
ColinMcKenz
closed
1 year ago
1
Error with Griffin Nucleosome Profiling
#7
sashamain
closed
1 year ago
1
difficulties using your code
#6
bzip2
closed
1 year ago
1
Development
#5
adoebley
closed
2 years ago
0
Script for the nucleosome peak amplitude calculation?
#4
hyunhwan-jeong
closed
2 years ago
3
griffin_GC_counts.py fails on non ATCGN nucleotides in the reference
#3
willhooper
closed
2 years ago
2
Running griffin_GC_counts.py on a high coverage bam
#2
shahmj
closed
2 years ago
2
Provide instructions on how to generate the mapability file (or where to download)
#1
amcpherson
closed
3 years ago
2