aertslab / AUCell

AUCell: score single cells with gene regulatory networks
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could not find function "AUCell_run" #34

Closed ndrubins closed 1 year ago

ndrubins commented 1 year ago

Hi,

I installed the AUCell package from bioconductor but when calling the AUCell_run function (after loading the AUCell library) I'm getting the error: could not find function "AUCell_run"

Similarly, I'm getting the error: Error: 'AUCell_run' is not an exported object from 'namespace:AUCell' when trying to call the AUCell_run function by namespace: AUCell::AUCell_run

I removed AUCell and installed the github version. Calling the AUCell_run function without the namespace gives the same error as above, and calling it with the namespace gives this error:

Error in fetch(key) :
  lazy-load database '/home/ndr/R/AUCell/help/AUCell.rdb' is corrupt
In addition: Warning message:
In fetch(key) : internal error -3 in R_decompress1