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A python library for calculating Allan deviation and related
time & frequency statistics. LGPL v3+ license <https://www.gnu.org/licenses/lgpl.html>_.
Input data should be evenly spaced observations of either fractional frequency, or phase in seconds. Deviations are calculated for given tau values in seconds.
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Function Description Comment
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adev() Allan deviation Classic - use only if required - relatively poor confidence.
oadev() Overlapping Allan deviation General purpose - most widely used - first choice
mdev() Modified Allan deviation Used to distinguish between White and Flicker Phase Modulation.
tdev() Time deviation Based on modified Allan variance.
hdev() Hadamard deviation Rejects frequency drift, and handles divergent noise.
ohdev() Overlapping Hadamard deviation Better confidence than normal Hadamard.
pdev() Parabolic deviation Estimate uncertainty of Omega-counter data
totdev() Total deviation Better confidence at long averages for Allan deviation.
mtotdev() Modified total deviation Modified Total deviation. Better confidence at long averages for modified Allan
ttotdev() Time total deviation
htotdev() Hadamard total deviation
theo1() Theo1 deviation Theo1 is a two-sample variance with improved confidence and extended averaging factor range.
mtie() Maximum Time Interval Error
tierms() Time Interval Error RMS
gradev() Gap resistant overlapping Allan deviation
gcodev() Groslambert Covariance Improved three-corner-hat analysis
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Noise generators for creating synthetic datasets are also included:
More details on available statistics and noise generators : full list of available functions <https://allantools.readthedocs.io/en/latest/functions.html>_
see /tests for tests that compare allantools output to other (e.g. Stable32) programs. More test data, benchmarks, ipython notebooks, and comparisons to known-good algorithms are welcome!
Install from pypi::
pip install allantoolsLatest version + examples, tests, test data, iPython notebooks : clone from github, then install ::
python setup.py install(see python setup.py --help install for install options)
These commands should be run as root for system-wide installation, or
you can use the --user option to install for your account only.
Exact command names may vary depending on your OS / package manager / target python version.
Minimal example, phase data
We can call allantools with only one parameter - an array of phase data.
This is suitable for time-interval measurements at 1 Hz, for example
from a time-interval-counter measuring the 1PPS output of two clocks.
::
>>> import allantools
>>> x = allantools.noise.white(10000) # Generate some phase data, in seconds.
>>> (taus, adevs, errors, ns) = allantools.oadev(x)
when only one input parameter is given, phase data in seconds is assumed
when no rate parameter is given, rate=1.0 is the default
when no taus parameter is given, taus='octave' is the default
Frequency data exampleNote that allantools assumes non-dimensional frequency data input. Normalization, by e.g. dividing all data points with the average frequency, is left to the user.
::
>>> import allantools
>>> import pylab as plt
>>> import numpy as np
>>> t = np.logspace(0, 3, 50) # tau values from 1 to 1000
>>> y = allantools.noise.white(10000) # Generate some frequency data
>>> r = 12.3 # sample rate in Hz of the input data
>>> (t2, ad, ade, adn) = allantools.oadev(y, rate=r, data_type="freq", taus=t) # Compute the overlapping ADEV
>>> fig = plt.loglog(t2, ad) # Plot the results
>>> # plt.show()New in 2016.11 : simple top-level API <api.html>_, using dedicated classes for data handling and plotting.
::
import allantools # https://github.com/aewallin/allantools/
import numpy as np
# Compute a deviation using the Dataset class
a = allantools.Dataset(data=np.random.rand(1000))
a.compute("mdev")
# New in 2019.7 : write results to file
a.write_results("output.dat")
# Plot it using the Plot class
b = allantools.Plot()
# New in 2019.7 : additional keyword arguments are passed to
# matplotlib.pyplot.plot()
b.plot(a, errorbars=True, grid=True)
# You can override defaults before "show" if needed
b.ax.set_xlabel("Tau (s)")
b.show()Jupyter notebooks are interactive python scripts, embedded in a browser, allowing you to manipulate data and display plots like easily. For guidance on installing jupyter, please refer to https://jupyter.org/install.
See /examples for some examples in notebook format.
github formats the notebooks into nice web-pages, for example