alesssia YAMP issues - Githubissues

alesssia / YAMP

YAMP: Yet Another Metagenomic Pipeline

GNU General Public License v3.0

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issues

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Error: `Missing process or function` when running the pipeline

#29 jacodela opened 4 months ago
2
How can I split clean reads into R1 and R2 files

#28 jehaab closed 5 months ago
0
ERROR PULLING DOCKER UNIREF DATABASES

#27 EorgeKit opened 1 year ago
1
Failed to pull singularity image

#26 fredrickkebaso opened 1 year ago
0
Something missing in singularity container

#25 mfreidin1975 opened 2 years ago
1
ChocoPhlAn and UniRef databases for HUMAnN

#24 diptarajchaudhari opened 2 years ago
2
humann not in the biobaker container

#23 poquirion closed 2 years ago
3
Error on Real Dataset

#22 ParsaGhadermazi opened 2 years ago
0
Error on running test

#21 ParsaGhadermazi closed 3 years ago
14
Error running on test data

#20 Rhinogradentia closed 3 years ago
16
Fix base > standard in README.md

#19 gui11aume closed 3 years ago
3
Missing assets

#18 gui11aume closed 3 years ago
3
YAMP test fails on fresh install — Ubuntu 20

#17 gui11aume closed 3 years ago
9
Error executing process > 'dedup' with message Command output empty

#16 ramakrishnas opened 3 years ago
1
SGE cluster queue specification

#15 CRichard21 opened 4 years ago
2
alphaDiversity process does not find null file and fails in AWS batch

#14 gilfreund closed 4 years ago
8
Question on bbduk command usage

#13 tamuanand closed 5 years ago
3
Can I run YAMP locally?

#12 biofuture opened 5 years ago
5
Dockerfile with Miniconda3 (Python3)

#11 junaruga closed 3 years ago
3
Upgrade config using process selector syntax

#10 pditommaso closed 5 years ago
0
error when running on my Mac

#9 edxxgardo closed 5 years ago
0
BowTie2 database file for MetaPhlAn2

#8 kviljoen closed 5 years ago
2
docker run fail for demo data

#7 wangdatou2009 closed 6 years ago
7
some documentation suggestions

#6 will-rowe closed 6 years ago
7
Deduplication

#5 SilasK closed 6 years ago
3
memory limit

#4 SilasK closed 6 years ago
1
Documentation updates

#3 richardjdavies closed 6 years ago
1
HUMAnN2 requires diamond<0.9.0

#2 richardjdavies closed 6 years ago
8
running yamp with docker

#1 sbastkowski closed 7 years ago
1