emanjson2imodxf

Convert tilt-series alignments from EMAN2 json files to IMOD format xf files.

pip install emanjson2imodxf

Usage: emanjson2imodxf [OPTIONS]

  Convert an EMAN2 json file into an IMOD xf file.

Options:
  -i, --input PATH            EMAN2 json file  [required]
  -o, --output-basename PATH  basename for IMOD .xf and .tlt files  [required]
  --help                      Show this message and exit.

Changelog

• v0.0.1 produce .xf file
• v0.0.2 produce .xf and corresponding .tlt file, API change
• v0.0.3 fix a bug in the output .tlt file (thanks @alexjnoble)
• v0.0.4 include tilt azimuth (untested, based on a suggestion from @alexjnoble)