alosdiallo DNA_Rchitect issues

alosdiallo / DNA_Rchitect

A Shiny App for visualizing genomic data

http://shiny.immgen.org/DNARchitect/

MIT License

18 stars 9 forks source link

issues

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Shiny online app is hanging frequently ? some files missing in local installation

#49 bioarpit1 opened 4 years ago
0
Loading ImmGen_T.Nve.Sp.ATAC.bg plus hic_bedpe.txt leads to an infinite loop of connecting and disconnecting

#48 alosdiallo opened 5 years ago
4
Change: An error has occurred. Check your logs or contact the app author for clarification.

#47 alosdiallo closed 5 years ago
1
Error message to check logs must be removed

#46 alosdiallo closed 5 years ago
2
Select colors for bezier curves should say "Select color for data"

#45 alosdiallo closed 5 years ago
1
network names should match Publication figure

#44 alosdiallo closed 5 years ago
1
You can't load more than 1 dataset

#43 alosdiallo closed 5 years ago
3
Chip-seq sample data needs citation information

#42 alosdiallo closed 5 years ago
1
If you do not select colors the box should be red

#41 alosdiallo closed 5 years ago
6
If you fail to pick a color the app fails, if you then select colors it is nothing happens when you select submit perimeters

#40 alosdiallo closed 5 years ago
1
Loading sample data after sample data was loaded required re-fresh

#39 alosdiallo closed 5 years ago
2
K562 data labeling on DNA_Rchitect

#38 rnr-HMS closed 5 years ago
1
Edge overlap issue in network output

#37 rnr-HMS opened 5 years ago
3
Make sure interactive tutorial works

#36 alosdiallo closed 5 years ago
5
Loading sample data does not display information about the dataset

#35 alosdiallo closed 5 years ago
2
The pdf fails to load when I click on the help button.

#34 alosdiallo closed 5 years ago
5
Add to the site: Tcon_Immgen_3.bg Treg_Immgen_3.bg

#33 alosdiallo closed 5 years ago
4
List the organism for the sample data

#32 alosdiallo closed 5 years ago
5
Add pdf tutorial to site

#31 alosdiallo closed 5 years ago
5
Update the logo

#30 alosdiallo closed 5 years ago
2
clicking head or tail does not change the view

#29 alosdiallo closed 5 years ago
1
Gene font size

#28 rnr-HMS closed 5 years ago
6
Download all as PDF for network did not work

#27 rnr-HMS closed 5 years ago
0
Color not changing with HIC single data type

#26 rnr-HMS closed 5 years ago
5
Remove arrows on network plot

#25 alosdiallo closed 5 years ago
3
Datasets other than K562 are broken

#24 alosdiallo closed 5 years ago
6
Download svg crops out y axis name

#23 alosdiallo closed 5 years ago
1
Have 1 button to download all plots on the left

#22 alosdiallo closed 5 years ago
5
Change text for Download HiC Plot to "Download Bezier Curve Plot"

#21 alosdiallo closed 5 years ago
0
Put download HiC Plot below plot

#20 alosdiallo closed 5 years ago
1
Tie in sample data to experiment type

#19 alosdiallo closed 5 years ago
2
Download plot as pdf

#18 alosdiallo closed 5 years ago
5
Load sample data

#17 KHBHH closed 5 years ago
2
create network using Visnetwork package

#16 KHBHH closed 5 years ago
3
Add new datasets

#15 alosdiallo closed 5 years ago
3
Fix Y axis

#14 alosdiallo closed 5 years ago
2
Download XGMML does not download the correct file

#13 alosdiallo closed 5 years ago
5
The interactive tutorial button is covered up by the reload app button

#12 alosdiallo closed 5 years ago
4
Interactive tutorial and reload app should be on the same line

#11 alosdiallo closed 5 years ago
1
Make help document

#10 alosdiallo closed 5 years ago
5
change help button

#9 alosdiallo closed 5 years ago
1
Include an option for choosing colors for the bezier curves

#8 KHBHH closed 5 years ago
5
Change header text

#7 alosdiallo closed 5 years ago
1
Accept Data without a header

#6 alosdiallo closed 5 years ago
2
Add sushi heatmap

#5 alosdiallo opened 5 years ago
1
Adjust position of plots for Attack seq

#4 alosdiallo closed 5 years ago
11
Accept any text in header

#3 alosdiallo closed 5 years ago
2
Header check does nothing

#2 alosdiallo closed 5 years ago
4
species info not listed

#1 alosdiallo closed 5 years ago
1