alphaville / ToxOtis

An HTTP client for consuming OpenTox predictive toxicology web services.
http://opentox.ntua.gr/wiki
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h1. Τοξότης : Core Project

h2. About

Version:

Authors:

Description:

Quality Control:

Documentation: You will find numerous examples and hints on our "wiki page":http://opentox.ntua.gr/wiki. Additionally, the source code is accompanied by javadoc that is available on our "Nexus repository":http://opentox.ntua.gr:8081/nexus/index.html#view-repositories;releases~browsestorage.

h2. Use ToxOtis

h3. With Maven

Recently ToxOtis migrated to "Maven":http://maven.apache.org/ so it becomes really easy for you to use ToxOtis in your Maven projects. ToxOtis, since version 0.5.2 (beta) is deployed on the "AMBIT":http://ambit.uni-plovdiv.bg:8083/nexus/index.html#view-repositories;thirdparty~browsestorage repository as a 3rd-party 'artifact'. So, if you want to include the "core" module of ToxOtis in your project, simply put the following dependency in the pom file of your project:


  
  
    org.opentox.toxotis
    ToxOtis-core
    0.8.4
  
  

and add once the following repository:


  
  
    ntua-public
    http://opentox.ntua.gr:8081/nexus/content/repositories/public/
    
      false
    
  

h3. With Ant

If you prefer the ant-based ToxOtis the build.xml files are also distributed along with the source code. Alternatively run mvn ant:ant and create your own XML files for ant. Alternatively, you can download the latest version from our "Nexus repository":http://opentox.ntua.gr:8081/nexus/index.html#view-repositories;releases~browsestorage and add it to your classpath.

h2. Source Code and Javadoc

You can manually download the latest version of the source code of ToxOtis from github either in zip or tar.gz format (click on the "Downloads" button). This is most likely to be a SNAPSHOT version. If you want the source code and/or the javadoc for a particular release version, here is an example source code (just choose the version you prefer):



  org.opentox.toxotis
  ToxOtis-core
  0.8.4
  javadoc



  org.opentox.toxotis
  ToxOtis-core
  0.8.4
  sources

h2. Features

h3. Freely distributed

This project is licensed under the GNU GPL license version 3.0. A copy of this license is found in the ./Licenses folder. Licenses for all dependencies of this project are also included in this directory.

This project is being developed in the "Automatic Control Lab":http://www.chemeng.ntua.gr/labs/control_lab/index.html of the "School of Chemical Engineering":http://www.chemeng.ntua.gr/index.php?lang_change=en, "NTUA":http://www.ntua.gr/index_en.html, Athens, Greece and is part of "OpenTox":http://opentox.org; an EU funded FP7 research project.

h3. Extensible

We work on various extensions for ToxOtis including modules that will facilitate external developers towards builing their own web service applications or applications that need to consume OpenTox web services as client. Modules that provide extra security mechanisms and local account management, Hibernate support for ToxOtis to provide persistence for all core ToxOtis objects (Datasets, Algorithms, Models etc), Triple-storage database support (TDB) and lots of other features are under design and construction. The first release of "ToxOtis-Persistence":http://github.com/hampos/ToxOtis-persistence, a persistence module for ToxOtis, provides hibernate support for the core project.

h2. License

This project, as well as all other projects developed by the NTUA developers team under OpeTox, is licensed under the "GNU GPL license version 3":http://www.gnu.org/licenses/gpl.html. There is a considerable debate taking place in the open source community regarding the use of the GPL or LGPL, while a variety of other licenses can be found on the web as well. However it is GNU itself that prompts developers to use GPL (read "this article":http://www.gnu.org/philosophy/why-not-lgpl.html). The license of this project (ToxOtis) is also inherited by its modules (ToxOtis-core, ToxOtis-persistence and ToxOtis-benchmark). Information about the licenses of the project are also provided in its "pom.xml file":https://github.com/alphaville/ToxOtis/blob/master/pom.xml including information about the involved developers and organizations.

h2. Stay Tuned

Follow "isToxic":http://twitter.com/isToxic on Twitter and stay tuned with the latest updates!