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amepproject
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amep
The Active Matter Evaluation Package (AMEP) - a Python library for the analysis of particle-based and continuum simulation data of soft and active matter systems
https://amepproject.de/
GNU General Public License v3.0
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FRQ: Generic text particle trajectory reader
#89
kai-luca
opened
2 days ago
0
fixes utils.detect2peaks not detecting peaks at borders
#88
kay-ro
closed
1 week ago
0
BUG: utils.detect2peaks does not detect maxima at the borders correctly
#87
kay-ro
closed
1 week ago
0
adds single particles to cluster list
#86
kay-ro
closed
1 week ago
0
BUG：<When calculating the Cluster Size Distribution (CSD), some results are missing.>
#85
wztang
closed
1 week ago
3
plot.style mode simplification
#84
kay-ro
closed
1 week ago
0
pcf_angle fix
#83
kay-ro
closed
1 week ago
0
FRQ: frame.plot() shortcut to plot.particles/field()
#82
kay-ro
opened
3 weeks ago
0
FRQ: skip keyword for time instead of percentage
#81
kay-ro
opened
3 weeks ago
0
fix of gyration tensor calculation
#80
kay-ro
closed
1 week ago
0
BUG: pbc.pbc_diff_rect incorrect
#79
kay-ro
closed
1 week ago
0
BUG: wrong calculation or gyration tensor
#78
kay-ro
closed
1 week ago
1
trying to update gromacs_reader branch to release-1.0.3
#77
kay-ro
closed
1 week ago
0
Release 1.0.3
#75
kay-ro
closed
1 month ago
0
Release 1.0.3
#74
kay-ro
closed
1 month ago
0
DOC: amep.spatialcor.sf2d missing bracket in the label of the example plot
#73
hechtprojects
opened
1 month ago
0
Website readme optimization
#72
hechtprojects
closed
1 month ago
0
BUG: error running evaluate.PCFangle
#71
kay-ro
closed
1 week ago
1
gromacs+gsd/hoomd readers, general dist function, issues fixed
#70
kay-ro
closed
1 week ago
2
BUG: evaluate.ClusterGrowthRate incorrect computation for fields
#69
kay-ro
opened
1 month ago
0
BUG: frame.data(...) returns data in wrong order
#68
kay-ro
closed
1 week ago
1
Box boundary corrections
#67
eurusebr
closed
1 month ago
0
DOC: Re-structure Readme and website
#66
kay-ro
opened
1 month ago
0
BUG: ClusterGrowth: LAMMPS handle coordinates slightly outside box
#65
kay-ro
closed
1 week ago
2
FRQ: different default colors for plots
#64
kay-ro
opened
1 month ago
0
FRQ: consistency in evaluate classes - nav
#63
kay-ro
opened
1 month ago
1
FRQ: rename plot.box to plot.box_boundary
#62
kay-ro
opened
1 month ago
1
BUG: average_func returns incorrect frames
#60
kay-ro
closed
1 week ago
2
DOC: ClusterGrowth example issue
#59
bemde42
closed
1 week ago
0
BUG: ClusterGrowth mode largest
#58
bemde42
closed
1 week ago
6
FRQ: general distribution evaluate-class
#57
kay-ro
closed
1 week ago
0
DOC: box_boundary description inconsistent
#56
kay-ro
closed
1 week ago
0
DOC: inline math expressions not rendered correctly
#55
kay-ro
opened
1 month ago
0
Document fit functions
#54
kai-luca
closed
1 month ago
0
Bug patches kayro
#53
kay-ro
closed
1 month ago
0
BUG: LammpsReader angmom not imported
#52
kay-ro
closed
1 month ago
0
DOC: Documentation for fit functions should include mathematical expression
#51
kai-luca
closed
1 week ago
0
FRQ: generalize utils.mesh_to_coords to 3D
#50
kay-ro
opened
3 months ago
0
DOC: Trajectories not referencing to BaseFrame/BaseField
#49
kay-ro
closed
1 month ago
0
FRQ: h5amep format update for constant data
#48
kay-ro
opened
4 months ago
0
FRQ: gsd/gromacs reader - basic features
#47
kay-ro
closed
1 week ago
3
BUG: trajectory add/get_particle_info() not compatible with strings
#46
kay-ro
closed
1 month ago
4
Refactor tests
#45
kai-luca
closed
3 months ago
4
FRQ: Test Suite based on the example dataset
#44
kai-luca
closed
1 week ago
0
FRQ: allow user to supply part of a trajectory as trajectory
#43
kay-ro
opened
4 months ago
0
FRQ: update/append trajectory
#42
kay-ro
opened
4 months ago
0
BUG: h5amep format improvements - no zero-padding in h5amep file
#41
kay-ro
opened
4 months ago
0
FRQ: lattice function
#40
kay-ro
opened
4 months ago
1
DOC: Incorrect description of 'coords' and 'other_coords' in 'order.nearest_neighbors' and 'order.k_nearest_neighbors'
#39
aritra-mukhopadhyay
closed
1 month ago
0
BUG: 'exclude' option does not work for 'order.nearest_neighbors' and 'order.k_nearest_neighbors' when 'other_coords' is specified
#38
aritra-mukhopadhyay
opened
5 months ago
0
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