My docker images

https://hub.docker.com/u/asidd13 [asidd13 is obsolete]

https://hub.docker.com/u/amnahsid

Docker_Singularity_Images in this repo

• Rstudio
• Jupyterlab

Definitions of image file

https://apptainer.org/user-docs/master/definition_files.html

Jax's Singularity Registry:

https://jaxreg.jax.org/containers

Run and update simgularity images : https://jacksonlaboratory.sharepoint.com/sites/ResearchIT/SitePages/JAX-Singularity-Container-Registry-User-Guide.aspx

List of other useful Dockers

docker://rocker/tidyverse:latest will give you RStudio as well as tidyverse and all its dependencies https://divingintogeneticsandgenomics.rbind.io/post/run-rstudio-server-with-singularity-on-hpc/ (edited)

Renv and docker

https://rstudio.github.io/renv/articles/docker.html

Seurat: https://jaxreg.jax.org/containers/569

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Helpful Peer Resources:

https://code.sbamin.com/hpc/cpu/sumner_2/

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Docker cheatsheet

A well organized guide to popular docker commands can be found here. For

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Future Exploration

Docker Compose - https://docs.docker.com/compose/compose-file/; https://docs.docker.com/compose/gettingstarted/

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Acknowledgements

• Slack CS-JAX group members
• Data enthusiasts for their insights in help forums @ www !