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annaritz / cancer-drug-pred

Source code for Cancer Drug Prediction based on Genetic Mutations
GNU General Public License v3.0
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cancer-drug-pred

This repo contains the source code for Cancer Drug Prediction based on Genetic Mutations

  1. Download the .py file and open in a Python IDE, using Python 3.6
  2. Dowload Ananconda, specifically scikit-learn 0.19.1, pandas 0.20.3, and pydot 1.2.3
  3. Download the given datafiles
  4. Run the program.
  5. The program will output a decision tree structure in .png format, a drug prediction accuracy value as a decimal between 0 and 1, and a drug prediction for a randomly selected patient.

Note: cvresults may need to be replaced with gridscores in older versions of pandas.