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aomlomics / protocols

Protocols used by AOML Omics labs, following the BeBOP-OBON standard
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Create figure showing where each marker (primer pair) maps to ribosomal operon #10

Open lukenoaa opened 2 months ago

lukenoaa commented 2 months ago

Here is a first draft. I would like to get a better rendering and alignment of the reference operons, perhaps showing the variable regions. rrna_operon_primers

lukenoaa commented 2 months ago

@ksilnoaa @marinednadude

lukenoaa commented 1 month ago

In addition to marking the start and end of each marker (positions based on a reference genome), we could add a distribution plot (kernel density estimate or histogram) showing the distribution of amplicon lengths. The distribution could be from rCRUX or another reference database.