arcadelab / FastSAM3D_slicer

A 3D Slicer extension for FastSAM3D
https://arxiv.org/abs/2403.09827
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FastSAM-3DSlicer: A 3D-Slicer Extension for 3D Volumetric Segment Anything Model with Uncertainty Quantification

paper \ FastSAM3D code \ video \ ARCADE lab, Johns Hopkins University \ Results

Table of contents

Introduction

What are SAM, SAMMed3D, FastSAM3D and FastSAM3D_slicer?

step 2: open the 3D slicer and open the extension manager, download the pytorch extension, and restart the slicer. step21 step22 step 3: open the extension wizard in the 3D slicer. step3 step 4: click the select extension and choose the compressed file in step 1. step4 step 5: the extension will now be available here step5

Features

@misc{shen2024fastsam3d,
      title={FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images}, 
      author={Yiqing Shen and Jingxing Li and Xinyuan Shao and Blanca Inigo Romillo and Ankush Jindal and David Dreizin and Mathias Unberath},
      year={2024},
      eprint={2403.09827},
      archivePrefix={arXiv},
      primaryClass={eess.IV}
}

@article{shen2024fastsam,
  title={FastSAM-3DSlicer: A 3D-Slicer Extension for 3D Volumetric Segment Anything Model with Uncertainty Quantification},
  author={Shen, Yiqing and Shao, Xinyuan and Romillo, Blanca Inigo and Dreizin, David and Unberath, Mathias},
  journal={arXiv preprint arXiv:2407.12658},
  year={2024}
}