arq5x bedtools issues - Githubissues

arq5x / bedtools

A powerful toolset for genome arithmetic.

http://code.google.com/p/bedtools/

GNU General Public License v2.0

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issues

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WindowMaker: bugfix with using "srcwinnum" + genome

#20 agordon closed 12 years ago
1
Second attempt at auto-versioning

#19 agordon closed 12 years ago
1
Makefile: add DEBUG compiler option.

#18 agordon closed 12 years ago
2
Restructure auto-git-version

#17 agordon closed 12 years ago
1
Makefile: Auto-generate version string from Git version

#16 agordon closed 12 years ago
0
Feature/makewindows with i ds1

#15 agordon closed 12 years ago
1
Regression on -wao?

#14 jakebiesinger closed 12 years ago
2
Add ignore options for features up- and downstream of A

#13 jakebiesinger closed 12 years ago
4
Build fails on VectorOps, groupBy

#12 aksarkar closed 12 years ago
4
include <algorithm> for gcc 4.4.3

#11 daler closed 12 years ago
0
bedtools git archive is very large due to old binaries and data files

#10 bpow closed 11 years ago
3
Signed distance for closestBed

#9 jakebiesinger closed 13 years ago
3
-sm -> -Sm

#8 daler closed 13 years ago
0
include <cstdlib> in lineFileUtilities.h for gcc 4.4.3

#7 daler closed 13 years ago
0
fjoin fails with empty files

#6 jakebiesinger closed 13 years ago
3
commit 455c52e54a025279df28 causes regression in fFB range checking

#5 kortschak closed 13 years ago
1
enhancement: allow flag to report multiple overlaps on same line in closestBed

#4 brentp closed 13 years ago
2
Zero Length features for coverageBed get enlarged

#3 idot closed 11 years ago
1
coverageBed output positions wrong for bed input files (regression)

#2 idot closed 13 years ago
1
Zero Length Feature Support for intersectBed

#1 arrogantrobot closed 11 years ago
1