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asmagen / robustSingleCell

Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.
http://dx.doi.org/10.1016/j.celrep.2019.10.131
MIT License
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Outputs to user interface #26

Open asmagen opened 5 years ago

asmagen commented 5 years ago

Many outputs are printed only to file rather than both user interface and file. For example the final number of variable genes isn't printed in the first run of get.variable.genes (but it does when you run it again). Similarly for PCA/clustering.