I noticed that "SAMap accepts file paths to unprocessed, raw .h5ad files. The only processing that should be done on these files is to remove low-quality cells. Otherwise, they should be completely unprocessed. ”
this means that， I should use a unprocessed, raw .h5ad files with non-normalized count matrix？
atarashansky
commented
1 year ago
Hello,
I noticed that "SAMap accepts file paths to unprocessed, raw .h5ad files. The only processing that should be done on these files is to remove low-quality cells. Otherwise, they should be completely unprocessed. ”
this means that， I should use a unprocessed, raw .h5ad files with non-normalized count matrix？