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atarashansky / SAMap

SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.
MIT License
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ModuleNotFoundError: No module named 'samalg' #120

Closed DinithiRajapaksha closed 12 months ago

DinithiRajapaksha commented 1 year ago

Hi, I get the following error. I have installed SAMap following the vignette. Can you please help me to resolve this issue

ModuleNotFoundError Traceback (most recent call last) Cell In[1], line 1 ----> 1 from samap.mapping import SAMAP 2 from samap.analysis import (get_mapping_scores, GenePairFinder, 3 sankey_plot, chord_plot, CellTypeTriangles, 4 ParalogSubstitutions, FunctionalEnrichment, 5 convert_eggnog_to_homologs, GeneTriangles) 6 from samalg import SAM

File ~\samap_directory\samapinit.py:4 2 import scipy as sp 3 import numpy as np ----> 4 import samalg.utilities as ut 5 import warnings 6 import scanpy as sc

ModuleNotFoundError: No module named 'samalg'

atarashansky commented 1 year ago

Try running pip install sam-algorithm

DinithiRajapaksha commented 1 year ago

Thank you very much.

Kind regards, Dinithi Rajapaksha

On Fri, Jul 21, 2023 at 10:39 PM atarashansky @.***> wrote:

Try running pip install sam-algorithm

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