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MitoNuc
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Doesn't yet deal with integrating mitochondrial genomes into mt results
#10
atcg
opened
11 years ago
0
subset_mito_db.pl currently works on the higher taxon ID level
#9
atcg
opened
11 years ago
0
Count how many of the mitochondrial GIs are in the big GI list I'm subtracting them from
#8
atcg
opened
11 years ago
0
Feed subset_mito_db.pl lower level (family) taxon IDs iteratively, instead of high-level identifier (like 8948)
#7
atcg
opened
11 years ago
0
Clustering is broken--clustering to species (from long records) instead of by gene
#6
atcg
opened
11 years ago
0
Must catch genome sequences in the refseq_genomic database
#5
atcg
opened
11 years ago
0
Add command line flag for taxIDs_to_GIs.pl to select high-level taxID to search for
#4
atcg
closed
11 years ago
0
Add protein sequence GI list creation to taxID_to_GIs.pl
#3
atcg
opened
11 years ago
1
updateblastdb.sh should create aliases for necessary database combinations (nucleotides/proteins/etc...)
#2
atcg
opened
11 years ago
0
updateblastdb.sh should update taxonomy database in $BLASTDB
#1
atcg
closed
11 years ago
0