aws-quickstart quickstart-illumina-dragen issues

aws-quickstart / quickstart-illumina-dragen

AWS Quick Start Team

Apache License 2.0

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issues

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Added note in README informing of content archival

#61 vsnyc closed 8 months ago
0
Docs 2.1

#60 davmayd closed 11 months ago
0
Choose of DRAGEN Complete Suite version

#59 junyanzho opened 1 year ago
1
QSS launched through aws batch jobs cannot find existing s3

#58 caiprozect opened 1 year ago
0
Data transfert S3 to instance cost

#57 quentin67100 opened 2 years ago
6
Add input option download

#56 ericpanyc closed 1 year ago
1
Added eu-central-1 to allowed Regions and updated AMI mapping

#55 vsnyc closed 2 years ago
1
Updated AMI IDs and changed repo source to ECR public in Dockerfile

#54 vsnyc closed 2 years ago
4
Changing team in CODEOWNERS

#53 andrew-glenn closed 2 years ago
0
Update for stack (e.g template yaml file)

#52 hmkim87 closed 1 year ago
1
Add support of downloading pedigree table file from S3 when running Dragen in Pedigree Mode

#51 ericpanyc closed 1 year ago
1
Default docker container entrypoint conflict with nextflow awsbatch executor

#50 ericpanyc opened 2 years ago
1
Regarding of Instance type

#49 hmkim opened 2 years ago
0
The solution is to expensive to use by default

#48 markotitel opened 2 years ago
0
Very slow speeds for downloading fastq from s3

#47 siyervervetx opened 2 years ago
1
Error in deduplication

#46 siyervervetx opened 2 years ago
0
Addressed issues identified by cfn-lint

#45 vsnyc closed 3 years ago
0
Description of min vCPU to warn users on the impact of changing that value

#44 drewdresser opened 3 years ago
0
Updated deployment guide link

#43 vsnyc closed 3 years ago
0
Doc edits - minor updates

#42 vsnyc closed 3 years ago
0
Doc edits - docs 2.0 conversion

#41 vsnyc closed 3 years ago
0
update to remove python2.7 dependencies

#40 quilesw closed 3 years ago
1
[taskcat-ci] Updating submodules

#39 olichou closed 3 years ago
0
Updated adoc files and images

#38 olichou closed 3 years ago
0
Updated InstanceType default to f1.4xlarge and swapped ComputeEnvironment order

#37 vsnyc closed 3 years ago
0
Updated Dragen AMI to v 3.7.5 and added a LaunchTemplate to explicitly restart ecs-agent

#36 vsnyc closed 3 years ago
0
Batch job stuck in RUNNABLE state (AMI cannot be described)

#35 usuyama closed 3 years ago
7
DRAGEN v3.6.3

#34 bollig closed 3 years ago
1
updated AMI IDs to Dragen v3.6.3 and added eu-west-2 and eu-central-1 regions

#33 bollig closed 3 years ago
0
Unable to run batch jobs - S3 permission denied

#32 ury closed 3 years ago
8
Added filter to automatically update AMI ID from Marketplace

#31 vsnyc closed 4 years ago
0
Sig v4 compatibility: https://fwd.aws/68Gp6

#30 vsnyc closed 4 years ago
0
Merge some missing bug fixes and enhancements

#29 partha-edico closed 4 years ago
0
Error when running

#28 IvantheDugtrio closed 4 years ago
12
Upgrade CopyZips from Python 2.7 to 3.x

#27 andrew-glenn closed 3 years ago
1
Fix to dragen wrapper to handle FASTQ list

#26 partha-edico closed 4 years ago
0
Updates to support f1.4xlarge instances to run Dragen

#25 partha-edico closed 4 years ago
0
User Guide document needs to be updated for Hash Table Generation

#24 partha-edico opened 5 years ago
2
Quickstart needs to support f1.4x instance type

#23 partha-edico closed 4 years ago
2
Changes to Dragen App

#22 partha-edico closed 5 years ago
1
Update README.md file to describe how to run a Batch job

#21 partha-edico closed 6 years ago
0
Add additional test cases for taskcat

#20 ajfriedman18 closed 5 years ago
3
Add Cleanup Script

#19 ajfriedman18 closed 5 years ago
0
Develop

#18 partha-edico closed 6 years ago
0
Container build - moving to develop

#17 ajfriedman18 closed 6 years ago
0
Batch cfn

#16 ajfriedman18 closed 6 years ago
0
Validate all templates completed

#15 ajfriedman18 closed 6 years ago
1
Add workload-master.template

#14 ajfriedman18 closed 6 years ago
1
Add workload.template

#13 ajfriedman18 closed 6 years ago
2
Add app directory for dragen docker app

#12 partha-edico closed 6 years ago
5