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baoe
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AlignGraph
Algorithm for secondary de novo genome assembly guided by closely related references
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Command line specification
#42
zcalamari
opened
1 year ago
0
BLAT ERROR
#41
carlferr
opened
3 years ago
0
A suggestion
#40
zhutao1009
closed
3 years ago
0
Get stuck in bowtie-align
#39
FelipeMelis
closed
4 years ago
1
Makefile
#38
dslater82
opened
4 years ago
0
How to make AlignGraph to use pBLAT by specifying the number of threads.
#37
chirrie
opened
5 years ago
2
distanceLow and insertLow parameter calculation from paired-end reads
#36
chirrie
opened
5 years ago
0
alignGraph failed with error: INCONSISTENT PE FILES!
#35
wul88
opened
5 years ago
1
AlignGraph stop without error message
#34
YFelixChen
opened
5 years ago
0
Reference Genome for Eukaryotes
#33
GabrielaPinho
opened
6 years ago
1
Aligngraph comes back with 'CANNOT OPEN FILE!'
#32
lulux719
opened
7 years ago
1
Extended Output
#31
alex-b-chase
opened
7 years ago
2
BOWTIE2 CALL FAILED
#30
jimmyjiming
opened
7 years ago
2
Crash when creating _short_initial_contigs_extended_contigs.* files
#29
YannDussert
opened
7 years ago
1
Time-consuming step in AlignGraph
#28
danshu
closed
7 years ago
2
BLAT CALL FAILED! (New problem for existing issue)
#27
cistarsa
opened
7 years ago
9
Having trouble resuming
#26
edraizen
opened
7 years ago
1
BLAT/PBLAT issue "Maximum single piece size (5000) exceeded"
#25
Schum1
opened
8 years ago
6
Galaxy wrapper for AlignGraph
#24
mictadlo
opened
8 years ago
0
Parallelizing read grouping post alignment
#23
ramprasadn
opened
8 years ago
4
How to chose pblat instead of blat or nucmer
#22
DHatziioanou
opened
8 years ago
3
BLAT call fails
#21
sandrasan
opened
8 years ago
1
distanceLow and insertLow parameter calculation
#20
sandrasan
opened
8 years ago
4
PE read files that are not one-to-one mapped??
#19
agombolay
opened
8 years ago
0
Reference genome question regarding mate pairs
#18
ergarzaz
opened
8 years ago
1
BLAT call failed with Aligngraph
#17
meetasunil
opened
8 years ago
16
Support piping input from stdin
#16
jvollme
opened
8 years ago
1
AlignGraph getting stuck on Bowtie2-align
#15
Anabaena
opened
8 years ago
5
exit unexpectly
#14
shenwei356
opened
9 years ago
1
implementing parallelized blat?
#13
kevin-oh
opened
9 years ago
3
Continuing aborted run
#12
zwuckl
opened
9 years ago
2
Crashes with Segmentation Fault
#11
jflowers002
opened
9 years ago
4
AlignGraph terminated with error message
#10
ArmelNgas
opened
9 years ago
14
AlignGraph running indefinitely
#9
ramesh8v
opened
9 years ago
12
Single Read Libraries
#8
LeeBergstrand
opened
9 years ago
3
Need testdata for AlignGraph running
#7
ArmelNgas
opened
9 years ago
1
ps: illegal option -- f
#6
kliere
opened
9 years ago
6
empty extendedContigs.fa
#5
amirfeizi
opened
9 years ago
1
Inconsistent PE files error
#4
rob123king
opened
9 years ago
8
SegFault -- out of bounds array index
#3
kmhernan
opened
10 years ago
1
std::bad_alloc
#2
d-j-e
closed
10 years ago
2
Segfault
#1
dbrami
closed
10 years ago
9