sk_tda : Skeena Region FLNRORD Telemetry Data Analysis
Usage
This repository contains a variety of scripts to analyse radio collared telemetry data. These include data preparation, home range estimations (MCP/Kernel Density), general data summaries and data visualisation/animaltion.
There are four core scripts that are required for the analysis, they need to be run in order:
Kernel Density Estimates
- 01_KDE_Caribou.R - script to run KDEs
- 01_KDE_Caribou_detail.R - script to test bandwidth (h parameter)
- 00_KDE_analysis_workflow.Rmd - script to report on KDE methods
- 00_KDE_analysis_workflow.html - output html document to describe methods
Minimum Convex Polygon
- 01_MCP_Kernal.R
Mortality Summaaries
- 03_mort_summary.R
Wolf RSF/HR analysis (in draft)
- 04.0_Wolf_MCP_Kernel.R - builds minimum convext polys and basic hrefkernel density estimates
- 04.1_Wolf_AvailablePts.R - draft script to extract random points to be used for RSF analysis
- 04.2_Wolf_sp_layer.R - draft sscript to compile spatial layers for RSF
- 04.3_Wolf_Logistic_regression.R - draft logistic regression for RSF
- 04.4_Wolf_animation.R - html animated graphics to show animal movement! (this is pretty cool!)
A more complete RSF scripting can also be found here https://github.com/bcgov/clus/blob/master/R/caribou_habitat/04_caribou_habitat_model_telemetry_data_prep_doc.Rmd compiled by Muhly, T.
Project Status
This project is currently in development
Getting Help or Reporting an Issue
To report bugs/issues/feature requests, please file an issue.
How to Contribute
If you would like to contribute, please see our CONTRIBUTING guidelines.
Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.
License
Copyright 2019 Province of British Columbia
This work is licensed under the Creative Commons Attribution 4.0 International License.
To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.This project was created using the bcgovr package.