bcgsc arks issues - Githubissues

bcgsc / arks

ARCHIVED 🌈Alignment-free scaffolding of genome assemblies with 10x Genomics Chromium reads. ARCS/ARKS projects have been consolidated: https://github.com/bcgsc/arcs

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Segmentation fault

#26 shameem356 closed 4 years ago
6
Perl library error

#25 apn83 closed 4 years ago
2
Questions about using multiple libraries

#24 kazuaki0816 closed 4 years ago
4
No scaffolding with arks-links

#23 rimjhimroy closed 4 years ago
4
no changes after scaffolding with arks-tigmint-links pipeline

#22 YiweiNiu closed 5 years ago
9
Scaffolds with a single ambiguous (N) base

#21 bbrunet closed 5 years ago
3
Minimum coverage requirements for ARKS?

#20 lindseyperrin closed 5 years ago
2
Unable to get the correct output running the ARKS demo

#19 lindseyperrin closed 5 years ago
3
original.gv is only 12 byte and scaffolds_imap.tsv is 0 byte

#18 ZuyaoLiu closed 5 years ago
3
barcodes not in the barcode multiplicity file?

#17 Asutu closed 5 years ago
3
Running arks / arcs / tigmint with multiple 10X libraries

#16 iwohlers closed 5 years ago
2
arks-make error : no rule to make target

#15 lebarsarthur closed 5 years ago
3
Uncertain about how to get BX tag from longranger

#14 zrlewis closed 5 years ago
3
arks on bioconda?

#13 nick-youngblut closed 5 years ago
2
calcBarcodeMultiplicities.pl error

#12 arunprasanna83 closed 5 years ago
3
Error running demo of Arks

#11 arunprasanna83 closed 5 years ago
8
bwa bam files under /tmp ?

#10 marchoeppner closed 5 years ago
2
Arks.h:30:35: fatal error: /google/sparse_hash_map: No such file or directory

#9 yangwu91 closed 6 years ago
6
Identical read headers in demo datat

#8 kfletcher88 closed 6 years ago
2
Question about interleaved input

#7 marchoeppner closed 6 years ago
6
There is an arcs_test-demo for arks, but isn't an arks_test-demo needed for arks?

#6 ckeeling closed 6 years ago
2
Change FASTQ line count from `int` => `size_t`

#5 jvhaarst closed 6 years ago
1
Should I use ARC or ARK

#4 billzt closed 6 years ago
2
Small ARKS bugs

#3 lcoombe closed 6 years ago
1
add option to output ABySS-friendly graphviz

#2 benvvalk closed 4 years ago
1
calcBarcodeMultiplicities.pl cannot handle uncompressed fastq as input

#1 benvvalk closed 4 years ago
1