bcgsc / mavis

Merging, Annotation, Validation, and Illustration of Structural variants
http://mavis.bcgsc.ca
GNU General Public License v3.0
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Feature/use pandas #244

Closed creisle closed 3 years ago

creisle commented 3 years ago
codecov[bot] commented 3 years ago

Codecov Report

Merging #244 (07af64f) into develop_v3 (b8e15d0) will decrease coverage by 0.28%. The diff coverage is 89.65%.

Impacted file tree graph

@@              Coverage Diff               @@
##           develop_v3     #244      +/-   ##
==============================================
- Coverage       86.64%   86.35%   -0.29%     
==============================================
  Files              53       53              
  Lines            8911     8957      +46     
  Branches         2242     2273      +31     
==============================================
+ Hits             7721     7735      +14     
- Misses            726      751      +25     
- Partials          464      471       +7     
Flag Coverage Δ
unittests 86.35% <89.65%> (-0.29%) :arrow_down:

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Impacted Files Coverage Δ
src/mavis/annotate/constants.py 100.00% <ø> (ø)
src/mavis/annotate/main.py 90.47% <ø> (ø)
src/mavis/bam/stats.py 86.66% <ø> (ø)
src/mavis/cluster/main.py 79.67% <ø> (+0.81%) :arrow_up:
src/mavis/main.py 89.14% <ø> (-0.09%) :arrow_down:
src/mavis/summary/summary.py 54.22% <ø> (ø)
src/mavis/validate/main.py 87.79% <ø> (ø)
src/mavis/tools/breakdancer.py 90.00% <83.33%> (-10.00%) :arrow_down:
src/mavis/util.py 77.51% <86.07%> (-3.17%) :arrow_down:
src/mavis/annotate/file_io.py 79.01% <87.80%> (-2.18%) :arrow_down:
... and 13 more

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