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bcgsc / mavis

Merging, Annotation, Validation, and Illustration of Structural variants
http://mavis.bcgsc.ca
GNU General Public License v3.0
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Cleaned up vcf.py and added unit tests for sniffles and cuteSV #269

Closed zhemingfan closed 2 years ago

zhemingfan commented 2 years ago

Initial integration of long read support into develop_v3

Improvements

codecov[bot] commented 2 years ago

Codecov Report

Merging #269 (94b7630) into develop_v3 (ca06372) will decrease coverage by 0.00%. The diff coverage is n/a.

Impacted file tree graph

@@              Coverage Diff               @@
##           develop_v3     #269      +/-   ##
==============================================
- Coverage       86.67%   86.67%   -0.01%     
==============================================
  Files              53       53              
  Lines            8909     8908       -1     
  Branches         2310     2310              
==============================================
- Hits             7722     7721       -1     
  Misses            726      726              
  Partials          461      461
Flag Coverage Δ
unittests 86.67% <ø> (-0.01%) :arrow_down:

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Impacted Files Coverage Δ
src/mavis/tools/vcf.py 94.28% <ø> (-0.05%) :arrow_down:

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