bcgsc / mavis

Merging, Annotation, Validation, and Illustration of Structural variants
http://mavis.bcgsc.ca
GNU General Public License v3.0
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Feature/type annotations #301

Closed creisle closed 2 years ago

creisle commented 2 years ago

Improvements

No changes to functionality

codecov[bot] commented 2 years ago

Codecov Report

Merging #301 (841c364) into develop_v3 (fefc095) will increase coverage by 0.06%. The diff coverage is 98.42%.

Impacted file tree graph

@@              Coverage Diff               @@
##           develop_v3     #301      +/-   ##
==============================================
+ Coverage       87.06%   87.12%   +0.06%     
==============================================
  Files              52       53       +1     
  Lines            8787     8831      +44     
  Branches         2290     2291       +1     
==============================================
+ Hits             7650     7694      +44     
  Misses            691      691              
  Partials          446      446              
Flag Coverage Δ
unittests 87.12% <98.42%> (+0.06%) :arrow_up:

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Impacted Files Coverage Δ
src/mavis/cluster/main.py 79.83% <ø> (ø)
src/mavis/validate/base.py 81.09% <ø> (-0.04%) :arrow_down:
src/mavis/annotate/protein.py 81.40% <90.47%> (-0.65%) :arrow_down:
src/mavis/interval.py 89.89% <95.83%> (+0.03%) :arrow_up:
src/mavis/align.py 85.35% <100.00%> (+0.09%) :arrow_up:
src/mavis/annotate/base.py 83.80% <100.00%> (+0.11%) :arrow_up:
src/mavis/annotate/file_io.py 76.83% <100.00%> (ø)
src/mavis/annotate/fusion.py 91.74% <100.00%> (+0.02%) :arrow_up:
src/mavis/annotate/genomic.py 88.09% <100.00%> (+0.16%) :arrow_up:
src/mavis/annotate/splicing.py 91.02% <100.00%> (+0.05%) :arrow_up:
... and 13 more

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