Currently, the Summary module takes in a tab delimited file (similar to a .bed file) as the input. For future iterations, we want to change it to a MAVIS .tab file format so that more information is included.
[ ] Change support in summary from tab delimited file to MAVIS file format, rename DGV to "known_sv" as SVs from more databases will be added
[ ] Add column for support for frequency of which a variant is observed
[ ] Add unit tests for data that pulls from external and internal Nanpore databases (decide on TSV or VCF file formats to support)
[ ] Add unique ID support to delineate which dataset a call is from
Overview
Currently, the Summary module takes in a tab delimited file (similar to a
.bedfile) as the input. For future iterations, we want to change it to a MAVIS.tabfile format so that more information is included.