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bedapub / splicekit

splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq
GNU General Public License v3.0
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Junctions min count filter as parameter #21

Closed grexor closed 1 year ago

grexor commented 1 year ago

core/junctions.py

# across ALL samples in the project, include junction in master table?
try:
    min_master_junction = splicekit.config.min_master_junction 
except:
    min_master_junction = 30